Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC024940.4-201ENST00000605507 246 ntBASIC4.72□□□□□ -1.65
PRKNO60260 AC018754.1-201ENST00000607486 925 ntBASIC4.72□□□□□ -1.65
PRKNO60260 AC063944.3-201ENST00000609969 533 ntBASIC4.72□□□□□ -1.65
PRKNO60260 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.72□□□□□ -1.65
PRKNO60260 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.72□□□□□ -1.65
PRKNO60260 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
PRKNO60260 CASC19-222ENST00000641321 1173 ntBASIC4.72□□□□□ -1.65
PRKNO60260 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.72□□□□□ -1.65
PRKNO60260 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 SCARNA15-201ENST00000607520 4325 ntBASIC4.72□□□□□ -1.65
PRKNO60260 MAPK10-328ENST00000641553 4009 ntBASIC4.72□□□□□ -1.65
PRKNO60260 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.71□□□□□ -1.65
PRKNO60260 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 AC245100.2-201ENST00000454544 1679 ntBASIC4.71□□□□□ -1.66
PRKNO60260 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
PRKNO60260 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.71□□□□□ -1.66
PRKNO60260 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 AC068870.3-201ENST00000625077 2536 ntBASIC4.71□□□□□ -1.66
PRKNO60260 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.71□□□□□ -1.66
PRKNO60260 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 SNORA2.3-201ENST00000383920 135 ntBASIC4.71□□□□□ -1.66
PRKNO60260 SNORA48.4-201ENST00000391089 134 ntBASIC4.71□□□□□ -1.66
PRKNO60260 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.71□□□□□ -1.66
PRKNO60260 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 AC079809.1-201ENST00000415468 276 ntBASIC4.71□□□□□ -1.66
PRKNO60260 AL158050.1-201ENST00000416077 457 ntBASIC4.71□□□□□ -1.66
PRKNO60260 AL606495.1-201ENST00000422100 813 ntBASIC4.71□□□□□ -1.66
PRKNO60260 MTCO2P17-201ENST00000424336 677 ntBASIC4.71□□□□□ -1.66
PRKNO60260 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.71□□□□□ -1.66
PRKNO60260 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 BX842559.2-201ENST00000451418 605 ntBASIC4.71□□□□□ -1.66
PRKNO60260 RN7SL443P-201ENST00000464331 290 ntBASIC4.71□□□□□ -1.66
PRKNO60260 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 PPM1AP1-201ENST00000502740 1135 ntBASIC4.71□□□□□ -1.66
PRKNO60260 AC121161.1-201ENST00000510606 652 ntBASIC4.71□□□□□ -1.66
PRKNO60260 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.71□□□□□ -1.66
PRKNO60260 OR5AZ1P-201ENST00000527448 943 ntBASIC4.71□□□□□ -1.66
PRKNO60260 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.71□□□□□ -1.66
PRKNO60260 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PRKNO60260 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 AC019322.1-201ENST00000571869 389 ntBASIC4.71□□□□□ -1.66
PRKNO60260 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.71□□□□□ -1.66
PRKNO60260 MTCYBP13-201ENST00000578634 1093 ntBASIC4.71□□□□□ -1.66
PRKNO60260 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 AL121652.1-201ENST00000608851 448 ntBASIC4.71□□□□□ -1.66
PRKNO60260 AP005229.2-201ENST00000609980 697 ntBASIC4.71□□□□□ -1.66
PRKNO60260 RNA5SP439-201ENST00000617595 124 ntBASIC4.71□□□□□ -1.66
PRKNO60260 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 FRG1EP-201ENST00000634469 770 ntBASIC4.71□□□□□ -1.66
PRKNO60260 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.71□□□□□ -1.66
PRKNO60260 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRKNO60260 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
PRKNO60260 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.7□□□□□ -1.66
PRKNO60260 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 RNA5SP428-201ENST00000365129 132 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC007618.1-201ENST00000366455 732 ntBASIC4.7□□□□□ -1.66
PRKNO60260 SNORA70.10-201ENST00000384515 134 ntBASIC4.7□□□□□ -1.66
PRKNO60260 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PRKNO60260 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 U3.32-201ENST00000408116 212 ntBASIC4.7□□□□□ -1.66
PRKNO60260 RN7SKP16-201ENST00000410180 299 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.7□□□□□ -1.66
PRKNO60260 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.7□□□□□ -1.66
PRKNO60260 RPS26P13-201ENST00000419030 330 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.7□□□□□ -1.66
PRKNO60260 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.7□□□□□ -1.66
PRKNO60260 RPL5P2-201ENST00000429598 854 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC009238.2-201ENST00000431026 355 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.7□□□□□ -1.66
PRKNO60260 PA2G4P6-201ENST00000438325 1197 ntBASIC4.7□□□□□ -1.66
PRKNO60260 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.7□□□□□ -1.66
PRKNO60260 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRKNO60260 TCEA1P1-201ENST00000449716 880 ntBASIC4.7□□□□□ -1.66
PRKNO60260 IGHV5-78-201ENST00000450948 295 ntBASIC4.7□□□□□ -1.66
PRKNO60260 OR52E3P-201ENST00000452083 936 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms