Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM38O00635 OR10T1P-201ENST00000424327 947 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 USP9YP14-201ENST00000430663 563 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM38O00635 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM38O00635 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM38O00635 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM38O00635 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM38O00635 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM38O00635 RN7SL570P-201ENST00000484405 292 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AC104687.1-201ENST00000485829 412 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 EIF1P7-201ENST00000487533 337 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM38O00635 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM38O00635 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM38O00635 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM38O00635 IGKV2D-10-201ENST00000520194 281 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM38O00635 AP006245.2-201ENST00000522004 300 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AC118942.1-201ENST00000529674 1035 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM38O00635 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM38O00635 RN7SL339P-201ENST00000580597 296 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM38O00635 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM38O00635 AC010503.3-201ENST00000594355 540 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 AC093673.2-201ENST00000609674 331 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 MIR7973-1-201ENST00000614683 76 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AC073569.3-201ENST00000619055 682 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AL669942.2-201ENST00000620352 697 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 AP003497.2-201ENST00000624220 967 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 AC099654.6-201ENST00000636487 512 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 AC002525.1-201ENST00000624392 1622 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 AC006484.1-201ENST00000435086 1884 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AC007938.2-201ENST00000604666 2634 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM38O00635 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 HSPA8P17-201ENST00000427029 1382 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 SEC63P2-201ENST00000503863 1939 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TRIM38O00635 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM38O00635 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM38O00635 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM38O00635 VN1R21P-201ENST00000426703 765 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 MTCO3P21-201ENST00000430791 643 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM38O00635 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM38O00635 HSFY3P-201ENST00000444242 1191 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 OR7E116P-201ENST00000448529 957 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AL450023.1-201ENST00000450868 751 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM38O00635 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM38O00635 AL035407.2-201ENST00000454090 378 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AC004129.2-201ENST00000457229 287 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 RPS4XP1-201ENST00000482189 787 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AC004815.1-201ENST00000484185 331 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 COX6B1P2-201ENST00000489624 230 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AC024558.1-201ENST00000505008 528 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM38O00635 OR10G5P-201ENST00000532733 358 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AC018552.1-201ENST00000562099 811 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AC027104.1-201ENST00000563702 681 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 MRPS21P7-201ENST00000566937 238 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM38O00635 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM38O00635 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM38O00635 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM38O00635 NANOGP3-201ENST00000605855 286 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AC106052.1-201ENST00000608029 497 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM38O00635 AL162574.1-201ENST00000615702 950 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AC009159.2-201ENST00000617603 606 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 AC008115.4-201ENST00000619780 775 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 MIR6837-201ENST00000620884 64 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM38O00635 SAMMSON-227ENST00000642114 1199 ntBASIC5.57□□□□□ -1.52
TRIM38O00635 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM38O00635 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms