Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RN7SL802P-201ENST00000577858 299 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 MIR5699-201ENST00000578903 90 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.92□□□□□ -1.78
SDCBPO00560 AC073137.1-201ENST00000605636 634 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AC008966.2-201ENST00000606157 453 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 AP000894.4-201ENST00000610185 483 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AC016542.2-201ENST00000624201 619 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SDCBPO00560 AL355480.1-201ENST00000629041 99 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
SDCBPO00560 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.92□□□□□ -1.78
SDCBPO00560 MIPEPP2-201ENST00000422560 1819 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SDCBPO00560 AC109780.1-201ENST00000451768 1344 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SDCBPO00560 NCLP2-201ENST00000416078 1462 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SDCBPO00560 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.91□□□□□ -1.78
SDCBPO00560 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 CDY11P-201ENST00000447168 1651 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.91□□□□□ -1.78
SDCBPO00560 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SDCBPO00560 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 TRAV35-201ENST00000390462 330 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
SDCBPO00560 DPPA2P3-201ENST00000411853 655 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 BX510359.3-201ENST00000422168 306 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 AL645608.4-201ENST00000423619 154 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 RPL21P43-201ENST00000425440 472 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.91□□□□□ -1.78
SDCBPO00560 AL627308.1-201ENST00000435693 821 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 OR1H1P-201ENST00000448731 937 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 AURKAPS2-201ENST00000454983 333 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.91□□□□□ -1.78
SDCBPO00560 RPS5P7-201ENST00000456664 608 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 AC110749.1-201ENST00000462007 357 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 AC026348.1-201ENST00000462549 1053 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 RN7SL177P-201ENST00000476596 299 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 AC012158.1-204ENST00000483430 465 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.91□□□□□ -1.78
SDCBPO00560 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 AC091868.1-201ENST00000508746 304 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SDCBPO00560 BTF3P13-201ENST00000513224 490 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 RNA5SP446-201ENST00000515955 82 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 AP000859.1-201ENST00000525536 307 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 GCSHP4-201ENST00000538792 439 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.91□□□□□ -1.78
SDCBPO00560 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.91□□□□□ -1.78
SDCBPO00560 AL451049.1-201ENST00000608672 497 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 AC007382.1-201ENST00000624376 2618 ntBASIC3.91□□□□□ -1.78
SDCBPO00560 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SDCBPO00560 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.91□□□□□ -1.78
SDCBPO00560 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDCBPO00560 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
SDCBPO00560 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.9□□□□□ -1.78
SDCBPO00560 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SDCBPO00560 AL442639.1-201ENST00000625030 1899 ntBASIC3.9□□□□□ -1.78
SDCBPO00560 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SDCBPO00560 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SDCBPO00560 OR4G1P-202ENST00000641173 1788 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.9□□□□□ -1.79
SDCBPO00560 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SDCBPO00560 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SDCBPO00560 RN7SKP115-201ENST00000363177 317 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 SPTLC1P2-201ENST00000407089 121 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 COX6B1P1-201ENST00000415962 213 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 CYCSP10-201ENST00000417973 294 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.9□□□□□ -1.79
SDCBPO00560 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.9□□□□□ -1.79
SDCBPO00560 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.9□□□□□ -1.79
SDCBPO00560 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.9□□□□□ -1.79
SDCBPO00560 OR52J1P-201ENST00000450596 932 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 RPL23AP65-201ENST00000475608 468 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.9□□□□□ -1.79
SDCBPO00560 AC091544.1-201ENST00000484702 348 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 RN7SL808P-201ENST00000496066 299 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SDCBPO00560 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SDCBPO00560 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SDCBPO00560 AC008033.2-201ENST00000542626 177 ntBASIC3.9□□□□□ -1.79
SDCBPO00560 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.9□□□□□ -1.79
SDCBPO00560 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms