Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MTND2P28-201ENST00000457540 1044 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 PPP1R11P1-201ENST00000486095 376 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC112184.1-201ENST00000505179 312 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC098799.3-201ENST00000506095 438 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC008782.1-201ENST00000603386 430 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC087468.1-201ENST00000604365 630 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 MIR6798-201ENST00000612887 67 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AL133243.1-201ENST00000614487 366 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC120338.1-201ENST00000625074 1541 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 RAD17P1-201ENST00000418130 2042 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 SMG1P4-204ENST00000523028 4131 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC005005.4-201ENST00000623789 16698 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AL359922.3-201ENST00000624779 1670 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 ELOCP19-201ENST00000411919 318 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 RPL18P10-201ENST00000425606 538 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AL732292.1-201ENST00000426692 226 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 RPL7AP10-201ENST00000481016 791 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC013356.1-201ENST00000489027 564 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC068831.4-201ENST00000556118 109 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 MIR4284-201ENST00000578924 81 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC115286.1-201ENST00000604298 434 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC002044.3-201ENST00000623314 541 ntBASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SMIM28A0A1B0GU29 AC125257.1-201ENST00000560400 2930 ntBASIC4.96□□□□□ -1.61
SMIM28A0A1B0GU29 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
SMIM28A0A1B0GU29 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
SMIM28A0A1B0GU29 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
SMIM28A0A1B0GU29 AC008079.2-201ENST00000623543 20396 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 RNU4-39P-201ENST00000362455 127 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 RNA5SP447-201ENST00000363749 119 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AL080315.1-201ENST00000406055 466 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 CBX1P3-201ENST00000413296 527 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 GTF3AP5-201ENST00000442645 697 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 MRPL48P1-201ENST00000445390 636 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AC104651.2-201ENST00000447549 528 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 ISCUP1-201ENST00000454451 448 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 RNU7-157P-201ENST00000459600 66 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 HPRT1P1-201ENST00000509498 657 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AC009643.1-201ENST00000532030 391 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms