Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC027228.2-201ENST00000567141 2154 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 RNA5SP428-201ENST00000365129 132 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AL109941.1-201ENST00000401925 229 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 SNORA77-201ENST00000408716 125 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 COX6CP13-201ENST00000428703 226 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 TCEA1P1-201ENST00000449716 880 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 OTX2P1-201ENST00000450956 354 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 NDUFB5P1-201ENST00000508134 564 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 EIF4A2P5-201ENST00000529914 499 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 MIR4675-201ENST00000577898 77 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 BX323046.1-201ENST00000610145 535 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC091905.4-201ENST00000623432 202 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 SAMMSON-213ENST00000641336 1521 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 PCAT14-202ENST00000627127 3935 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC093775.1-201ENST00000624154 1868 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC007996.1-201ENST00000620414 2821 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 RN7SKP104-201ENST00000362605 328 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 PTGES3P2-201ENST00000407942 482 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 RN7SKP125-201ENST00000410481 302 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 OR13Z1P-201ENST00000416141 834 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 OR7E125P-201ENST00000443450 846 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC004980.3-201ENST00000447046 365 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 TRY2P-201ENST00000448860 689 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 COX6B1P2-201ENST00000489624 230 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC005412.2-201ENST00000492004 341 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 RNU6-491P-201ENST00000516099 110 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 OR5AZ1P-201ENST00000527448 943 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AP000676.2-201ENST00000529711 301 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC074029.2-201ENST00000551045 634 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC027176.2-201ENST00000559166 746 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC106785.3-201ENST00000564064 847 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 OR1F2P-201ENST00000570470 933 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 MIR4472-2-201ENST00000582069 67 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 MEMO1P5-201ENST00000604810 406 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AL355816.2-201ENST00000610049 647 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AL353662.3-201ENST00000625131 237 ntBASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX9Q9Y5X1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX9Q9Y5X1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX9Q9Y5X1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SNX9Q9Y5X1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
SNX9Q9Y5X1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX9Q9Y5X1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX9Q9Y5X1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX9Q9Y5X1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX9Q9Y5X1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX9Q9Y5X1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms