Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC138832.1-201ENST00000522871 556 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC009974.1-201ENST00000608881 455 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 CU639417.4-201ENST00000623928 207 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AL691477.1-201ENST00000624398 162 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC090897.3-201ENST00000636973 1157 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 OR2L1P-202ENST00000641567 1023 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 ZNF663P-202ENST00000641770 1131 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC079776.5-201ENST00000641920 211 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 MTCO1P11-201ENST00000429111 1528 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC025470.1-201ENST00000510053 2032 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL355578.1-201ENST00000607405 1328 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 TMSB4XP8-201ENST00000402089 135 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 RNU2-65P-201ENST00000410162 185 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 TMSB4XP6-201ENST00000415187 135 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC027644.1-201ENST00000419595 298 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 RPF2P1-201ENST00000424137 906 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 TMSB4XP1-201ENST00000424567 135 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 C1DP1-201ENST00000426049 402 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL009174.1-201ENST00000426577 416 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL589880.1-201ENST00000448271 287 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC098826.2-201ENST00000452011 651 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 RN7SL72P-201ENST00000460697 269 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC006511.1-201ENST00000470614 315 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC087672.1-201ENST00000479876 766 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 RNA5SP362-201ENST00000516048 118 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL049872.1-201ENST00000556323 322 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 BPTFP1-201ENST00000579209 492 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL137072.1-201ENST00000603444 466 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL589674.2-201ENST00000604304 337 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 Z95327.3-201ENST00000610385 572 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL138478.1-201ENST00000612252 832 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC008115.3-201ENST00000614874 549 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL121895.2-201ENST00000619558 447 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC006963.1-201ENST00000624003 1052 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC006927.4-201ENST00000639187 543 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC015799.1-201ENST00000622996 3122 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 STX3-208ENST00000641815 3236 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 YES1P1-201ENST00000418510 1628 ntBASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
COL4A3BPQ9Y5P4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC025263.3-201ENST00000622965 1396 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AC125336.1-201ENST00000508893 2827 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 PHKBP1-201ENST00000450951 1951 ntBASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A3BPQ9Y5P4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms