Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 GAPDHP14-201ENST00000450472 937 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL389915.2-201ENST00000454576 441 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 RPL21P47-201ENST00000483696 477 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC109462.1-201ENST00000491087 368 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC005351.1-201ENST00000511152 786 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 RNU6-276P-201ENST00000516114 96 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 DUXAP5-201ENST00000529668 529 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL390334.1-201ENST00000556395 450 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC104229.1-201ENST00000561364 255 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC021483.2-201ENST00000567415 758 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 NIFKP6-201ENST00000598115 845 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC015722.2-201ENST00000622210 551 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AP002505.2-201ENST00000623585 696 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC120349.3-201ENST00000624377 529 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL078621.3-201ENST00000623707 2042 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 HSPA8P18-201ENST00000439846 1928 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 RPL23P2-201ENST00000320371 421 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 MIR133B-201ENST00000362210 119 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 RNU5B-4P-201ENST00000363508 111 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AP002784.2-201ENST00000397300 549 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 RNA5SP487-201ENST00000410186 122 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AL592310.1-201ENST00000414330 671 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 FO393414.1-201ENST00000428697 1184 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 RPS7P2-201ENST00000435134 607 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 SETP8-201ENST00000435341 628 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 MTCO2P20-201ENST00000437339 673 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AL772161.1-201ENST00000439130 476 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 ARF4P4-201ENST00000439608 520 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC092473.1-201ENST00000441098 221 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 RPS18P6-201ENST00000476880 458 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 MTND6P2-201ENST00000512226 524 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AP000676.2-201ENST00000529711 301 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC005341.1-201ENST00000571086 708 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 MIR4646-201ENST00000580775 63 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC005412.1-201ENST00000580812 1049 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 CBX3P2-202ENST00000583365 535 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 BMS1P7-201ENST00000602440 1052 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC087763.1-201ENST00000603391 286 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC073137.1-201ENST00000605636 634 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC116651.1-201ENST00000609724 556 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AL157392.4-201ENST00000609756 345 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC015712.7-201ENST00000615211 635 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 CU459211.1-201ENST00000635667 749 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AC132825.1-201ENST00000463573 2247 ntBASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
SSX2IPQ9Y2D8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
SSX2IPQ9Y2D8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
SSX2IPQ9Y2D8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms