Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 CEACAMP9-201ENST00000442990 513 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AL591363.1-201ENST00000450091 483 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 OR52Y1P-201ENST00000452418 828 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AL356981.1-201ENST00000454879 684 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 RPS29P33-201ENST00000456717 146 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AC116562.1-201ENST00000485355 781 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 CR383656.6-201ENST00000550518 394 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AC091042.1-201ENST00000579213 173 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AC096586.2-201ENST00000610260 441 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 uc_338.18-201ENST00000615451 175 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 RNA5SP443-201ENST00000363083 132 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 OR6C71P-201ENST00000432580 913 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC073052.1-201ENST00000440417 714 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AL031584.1-201ENST00000447169 754 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC000111.2-201ENST00000448200 210 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC073073.1-201ENST00000493920 463 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC008897.1-201ENST00000494006 347 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC002456.2-201ENST00000509356 380 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 RN7SKP276-201ENST00000516242 268 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 HNRNPRP2-201ENST00000528421 743 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC063949.1-201ENST00000552900 865 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AGGF1P9-201ENST00000561884 913 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AL022401.1-201ENST00000619498 108 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC243960.7-201ENST00000623532 707 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 AC083843.3-201ENST00000623679 2186 ntBASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP2Q9UDT6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 SNORA73.1-201ENST00000363107 205 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC019050.1-201ENST00000418508 492 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 RPL36AP15-201ENST00000444514 266 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 RPL7L1P1-201ENST00000448259 785 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 MTND2P17-201ENST00000550281 688 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AL512782.1-201ENST00000603093 364 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC010424.2-201ENST00000607594 443 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AL121890.2-201ENST00000617644 465 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC093775.1-201ENST00000624154 1868 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 SYT14P1-202ENST00000600441 1448 ntBASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP2Q9UDT6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms