Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 ZNF322P1-201ENST00000568013 1209 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 MTCYBP33-201ENST00000575007 1130 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 AC016839.1-201ENST00000578162 867 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 VN1R82P-201ENST00000601481 356 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 DUXAP11-201ENST00000603858 526 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 AC005840.5-201ENST00000619166 599 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 MIR6886-201ENST00000619864 61 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 AC079248.2-201ENST00000623779 326 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 CDRT1-208ENST00000630868 794 ntBASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCM2LQ9NUG4 Z99496.1-201ENST00000469424 1477 ntBASIC5.71□□□□□ -1.49
CCM2LQ9NUG4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCM2LQ9NUG4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCM2LQ9NUG4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCM2LQ9NUG4 AL591135.1-201ENST00000401578 5914 ntBASIC5.71□□□□□ -1.49
CCM2LQ9NUG4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCM2LQ9NUG4 Z98755.1-201ENST00000407015 1384 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 RNU6-619P-201ENST00000365146 108 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 RNU1-84P-201ENST00000365447 164 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 SNORD65.1-201ENST00000390889 71 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC003045.1-201ENST00000398779 713 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AL512422.1-201ENST00000407033 553 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC011233.1-201ENST00000422812 283 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC084754.1-201ENST00000463466 464 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 MTCYBP16-201ENST00000509187 1129 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 CDC42P3-201ENST00000518493 633 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC105185.1-201ENST00000518705 535 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC092709.1-201ENST00000521355 1045 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 NBR2-204ENST00000587322 63 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC106791.2-201ENST00000604680 391 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC109309.2-201ENST00000612597 332 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AL354976.1-201ENST00000613843 387 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AF001550.2-201ENST00000636643 217 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC022325.1-201ENST00000502748 2199 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 AC005539.1-201ENST00000443768 1479 ntBASIC5.71□□□□□ -1.5
CCM2LQ9NUG4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 AC024587.1-201ENST00000505925 2157 ntBASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 RNA5SP510-201ENST00000364697 99 ntBASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 RN7SKP81-201ENST00000365603 331 ntBASIC5.7□□□□□ -1.5
CCM2LQ9NUG4 ATP5F1P3-201ENST00000397213 657 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms