Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Z74021.1-201ENST00000423610 407 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 NRBF2P3-201ENST00000432731 865 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC097523.2-201ENST00000435551 652 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AP001880.2-201ENST00000538233 448 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC073137.1-201ENST00000605636 634 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 SNORD91B-202ENST00000608459 222 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 MIR7155-201ENST00000615925 56 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC234782.5-201ENST00000617723 324 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC107021.2-201ENST00000567714 2095 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 RN7SKP149-201ENST00000363008 344 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 RN7SKP100-201ENST00000411258 284 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC012519.1-201ENST00000424588 610 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 TMX2P1-201ENST00000436507 708 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC110749.1-201ENST00000462007 357 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC090142.1-201ENST00000465776 462 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 NPM1P29-201ENST00000483112 803 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 RPS4XP18-201ENST00000495480 763 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AK4P6-201ENST00000505168 528 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 OR5M14P-201ENST00000506803 618 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AL391358.1-201ENST00000605342 190 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AC026523.2-201ENST00000625039 7739 ntBASIC4.69□□□□□ -1.66
TREX1Q9NSU2 AL672167.1-203ENST00000641299 2975 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 SNORD96B-201ENST00000386148 79 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 RPL21P43-201ENST00000425440 472 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 PTMAP6-201ENST00000439110 327 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 RPL31P44-201ENST00000447680 377 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 OR1H1P-201ENST00000448731 937 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC063943.1-201ENST00000465434 453 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC074386.1-201ENST00000476560 767 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC008638.1-201ENST00000506035 866 ntBASIC4.68□□□□□ -1.66
TREX1Q9NSU2 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms