Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RTN4Q9NQC3 EIF2AP4-201ENST00000424793 1781 ntBASIC9.17□□□□□ -0.94
RTN4Q9NQC3 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
RTN4Q9NQC3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC9.17□□□□□ -0.94
RTN4Q9NQC3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 FAM91A3P-201ENST00000456826 2544 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC027287.1-201ENST00000553115 1453 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC018647.1-201ENST00000432866 1414 ntTSL 5 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 RNU6-339P-201ENST00000384310 107 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 MTCO3P46-201ENST00000425787 232 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 LINC00475-206ENST00000434944 796 ntTSL 3 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AL590326.1-201ENST00000460857 334 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC233702.1-201ENST00000482905 502 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 IGHVII-30-1-201ENST00000522218 301 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC068831.4-201ENST00000556118 109 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC087639.1-201ENST00000560974 920 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC090651.1-201ENST00000567865 634 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 MIR4301-201ENST00000577203 66 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC005703.4-201ENST00000580422 538 ntTSL 5 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 HMGN2P46-208ENST00000598619 490 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC078795.3-201ENST00000602913 472 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC091925.2-201ENST00000625059 256 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC112487.2-201ENST00000637950 304 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 AC100810.6-201ENST00000638068 285 ntBASIC9.16□□□□□ -0.94
RTN4Q9NQC3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
RTN4Q9NQC3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC023886.2-201ENST00000321285 411 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 EIF4A1P10-201ENST00000428832 1216 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 OR4K11P-201ENST00000431829 904 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 RPS15AP9-201ENST00000439856 381 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AP000281.1-201ENST00000444036 316 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 GAPDHP45-201ENST00000452090 349 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 RN7SL754P-201ENST00000470784 266 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 MED27-204ENST00000474263 762 ntTSL 2 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 DCAF13P2-201ENST00000514188 555 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 RPL23AP96-201ENST00000514593 591 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 SNORD116-26-201ENST00000516006 96 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC018653.2-201ENST00000540190 238 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC013565.2-201ENST00000564874 310 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 OR4K8P-201ENST00000578842 1048 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 MIR5008-201ENST00000584300 94 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC006504.5-211ENST00000588636 576 ntTSL 4 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC010680.2-201ENST00000603521 2117 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC9.15□□□□□ -0.94
RTN4Q9NQC3 AC090574.1-201ENST00000623186 233 ntBASIC9.15□□□□□ -0.94
RTN4Q9NQC3 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms