Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 ATP5F1P7-201ENST00000567330 760 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC090666.1-201ENST00000578241 445 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AP000919.1-202ENST00000581139 1264 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC008507.2-201ENST00000588402 1176 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC090330.1-201ENST00000588646 764 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 BNIP3P40-201ENST00000596017 556 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC125494.3-201ENST00000602759 455 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC005252.1-201ENST00000604518 1063 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC000068.2-201ENST00000608816 460 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 RNA5SP440-201ENST00000612665 119 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC104763.3-201ENST00000613765 618 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 AC127024.6-201ENST00000621598 424 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 OR8A1-204ENST00000642111 1145 ntBASIC5.12□□□□□ -1.59
BRF2Q9HAW0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRF2Q9HAW0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 MIR133B-201ENST00000362210 119 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 RNA5SP234-201ENST00000363916 119 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 RNU6-98P-201ENST00000384173 107 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 RPL22P22-201ENST00000395439 379 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 HSPA8P15-201ENST00000401676 786 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC241520.1-201ENST00000422654 1099 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC115285.1-201ENST00000424879 736 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 NAP1L4P2-201ENST00000425958 899 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 FO393414.1-201ENST00000428697 1184 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 KCTD9P1-201ENST00000430462 1167 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AL390119.1-201ENST00000440329 312 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 ELOCP10-201ENST00000440624 327 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 RPS11P7-201ENST00000442125 465 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 ARL5AP2-201ENST00000444698 533 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC044797.1-201ENST00000445744 679 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AL096803.2-201ENST00000450032 677 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 TPMTP4-201ENST00000450749 678 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 MTATP6P14-201ENST00000455189 673 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC058823.1-201ENST00000485315 474 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 RNA5SP230-201ENST00000517039 122 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AP003066.2-201ENST00000529375 555 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 YWHABP2-201ENST00000540201 713 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC040958.1-201ENST00000561102 201 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC106730.2-201ENST00000566641 540 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC010735.1-201ENST00000567305 1026 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 PSMA6P4-201ENST00000603247 718 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 ELOCP34-201ENST00000604436 327 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC010245.2-201ENST00000606908 1167 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC124016.2-201ENST00000610058 665 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC016597.2-201ENST00000613256 341 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC007275.1-201ENST00000621243 671 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC024595.1-201ENST00000623088 387 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC138907.10-201ENST00000623708 983 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 AC006042.3-201ENST00000454684 1469 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 RNF6P1-201ENST00000444889 1784 ntBASIC5.11□□□□□ -1.59
BRF2Q9HAW0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRF2Q9HAW0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms