Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC027104.1-201ENST00000563702 681 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 ATP5F1P7-201ENST00000567330 760 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 SNORD39.2-201ENST00000579995 76 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 MIR3614-201ENST00000581261 86 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 VN1R83P-201ENST00000595685 445 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC013244.1-201ENST00000604279 193 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC092681.3-201ENST00000609463 678 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AL035661.1-201ENST00000620459 1144 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC024884.1-201ENST00000620583 399 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 OR11H2-202ENST00000641517 1085 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC005261.4-201ENST00000600047 1385 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 LYARP1-201ENST00000436977 1501 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 PSG10P-201ENST00000501199 1500 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC104964.3-201ENST00000606115 2860 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC083843.2-201ENST00000568248 6253 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC008627.1-201ENST00000517511 1704 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 BCORP1-203ENST00000513194 5093 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC245100.2-201ENST00000454544 1679 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 HMGB3P18-201ENST00000406327 590 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL133482.1-201ENST00000415988 498 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 Z93019.1-201ENST00000416450 973 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 OR10T1P-201ENST00000424327 947 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL445567.1-201ENST00000439121 144 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 ARL4AP3-201ENST00000441452 574 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 ATP5C1P1-201ENST00000441945 895 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 UBE2D3P4-201ENST00000441973 436 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AURKAPS1-201ENST00000451805 1212 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 CDC42P1-201ENST00000456658 548 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL133477.1-201ENST00000457472 514 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC092865.4-201ENST00000477936 615 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC098583.1-201ENST00000480875 255 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 OR5BM1P-201ENST00000512021 366 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 RPL7L1P4-201ENST00000513004 707 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 NDUFB4P12-201ENST00000513465 390 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 PRELID3BP4-201ENST00000515476 571 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 FABP5P12-201ENST00000515543 389 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 snoZ278.1-201ENST00000517059 112 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC00556-201ENST00000569603 412 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL583856.2-201ENST00000606298 543 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AP003392.5-201ENST00000607857 415 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL450489.1-201ENST00000612071 468 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AC139769.3-201ENST00000618383 175 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL158163.2-201ENST00000619110 700 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms