Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC015804.1-201ENST00000622935 435 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC091948.2-201ENST00000636510 279 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC068254.2-201ENST00000623938 3577 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 RNU6-670P-201ENST00000364312 104 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 MIR7-1-201ENST00000384871 110 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 MIR93-201ENST00000385024 80 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 MT-RNR1-201ENST00000389680 954 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC009804.1-201ENST00000400949 179 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC013470.3-201ENST00000420252 1194 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 MTATP6P11-201ENST00000428071 670 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 MTCO1P57-201ENST00000432182 261 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AL392003.1-201ENST00000434394 243 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 YRDCP3-201ENST00000456507 480 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC089999.1-201ENST00000460336 374 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 ATG10-AS1-201ENST00000504846 648 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC117525.1-201ENST00000515228 503 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC107918.3-201ENST00000533272 382 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC074276.2-201ENST00000619891 348 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 AC112255.1-201ENST00000624070 2493 ntBASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC28BQ9BUN5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC107027.3-201ENST00000565095 3473 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AP001002.1-201ENST00000625148 1513 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC012020.1-201ENST00000624541 1728 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AL607077.1-201ENST00000401718 499 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 OR51A6P-201ENST00000418680 1004 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC007064.3-201ENST00000422608 359 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AL353748.1-201ENST00000440753 474 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 RPL31P53-201ENST00000457065 348 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC084754.1-201ENST00000463466 464 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 RPL23AP2-201ENST00000471227 466 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 RPS4XP18-201ENST00000495480 763 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 RN7SL466P-201ENST00000497546 295 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 OR4A46P-201ENST00000527255 933 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC027544.3-201ENST00000535082 757 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC022404.1-201ENST00000555320 273 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 MIR3908-201ENST00000579798 126 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 AC134669.1-201ENST00000581275 672 ntBASIC4.73□□□□□ -1.65
CCDC28BQ9BUN5 NPM1P45-201ENST00000583151 559 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms