Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 AC009852.2-201ENST00000567898 485 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 DPRXP4-201ENST00000578053 568 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 MTCYBP13-201ENST00000578634 1093 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.08□□□□□ -1.6
PKP4Q99569 MIMT1-201ENST00000597105 1050 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC135178.6-201ENST00000605314 398 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AL512329.2-201ENST00000607350 548 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC005156.1-201ENST00000613371 573 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 AL163051.2-201ENST00000618976 735 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC090527.3-201ENST00000619041 548 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.08□□□□□ -1.6
PKP4Q99569 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 OR52B5P-202ENST00000641118 1110 ntBASIC5.08□□□□□ -1.6
PKP4Q99569 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.08□□□□□ -1.6
PKP4Q99569 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKP4Q99569 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.08□□□□□ -1.6
PKP4Q99569 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.07□□□□□ -1.6
PKP4Q99569 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PKP4Q99569 MTCO1P4-201ENST00000520516 1409 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 AC235565.1-201ENST00000456962 1325 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 AC007382.1-201ENST00000624376 2618 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PKP4Q99569 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 RNU6-584P-201ENST00000410350 95 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 RPL12P9-201ENST00000412942 488 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.07□□□□□ -1.6
PKP4Q99569 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.07□□□□□ -1.6
PKP4Q99569 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.07□□□□□ -1.6
PKP4Q99569 HSPE1P16-201ENST00000426640 348 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 RPS29P10-201ENST00000439197 166 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 AC245047.2-201ENST00000441060 530 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 FHP1-201ENST00000442741 703 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 GAPDHP14-201ENST00000450472 937 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
PKP4Q99569 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 RPS26P39-201ENST00000469206 341 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 AC078857.1-201ENST00000469870 667 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 COPS8P2-201ENST00000473228 627 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 RPL21P6-201ENST00000479171 504 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 UBE2V1P12-201ENST00000503954 474 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PKP4Q99569 MTND1P24-201ENST00000552175 861 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.07□□□□□ -1.6
PKP4Q99569 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.07□□□□□ -1.6
PKP4Q99569 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 AC118658.2-201ENST00000618697 459 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 AC008115.4-201ENST00000619780 775 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 AC091932.2-201ENST00000623014 291 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 AP002505.2-201ENST00000623585 696 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.07□□□□□ -1.6
PKP4Q99569 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.07□□□□□ -1.6
PKP4Q99569 AL356118.1-201ENST00000635272 1078 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKP4Q99569 AC006210.2-201ENST00000367074 1545 ntBASIC5.07□□□□□ -1.6
PKP4Q99569 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PKP4Q99569 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
PKP4Q99569 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
PKP4Q99569 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PKP4Q99569 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PKP4Q99569 RNA5SP223-201ENST00000365174 120 ntBASIC5.06□□□□□ -1.6
PKP4Q99569 MIR600-201ENST00000385007 98 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms