Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 RAB9AP4-201ENST00000415230 609 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC092162.1-201ENST00000432828 434 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 RPL35AP21-201ENST00000437667 333 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC006466.1-201ENST00000438721 289 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC092324.1-201ENST00000468671 324 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 RNA5SP392-201ENST00000516905 112 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 Y_RNA.719-201ENST00000517156 106 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 MIR4480-201ENST00000582492 71 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC010424.2-201ENST00000607594 443 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC017079.1-201ENST00000333650 415 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 SEPT7P8-201ENST00000413308 775 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AL360081.1-201ENST00000428299 555 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC007559.1-201ENST00000428736 355 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC008072.1-201ENST00000434254 824 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 OR1H1P-201ENST00000448731 937 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC010733.1-201ENST00000451515 401 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AL356390.1-201ENST00000455684 397 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 MTND6P32-201ENST00000457611 483 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 SNORD116-30-201ENST00000516468 85 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC026688.1-201ENST00000520639 1168 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AL049839.1-201ENST00000556151 657 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 SNORA74C-1-201ENST00000580726 201 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 MIR3667-201ENST00000581025 74 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC100827.5-201ENST00000615883 426 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 CR381572.2-201ENST00000624852 397 ntBASIC5.02□□□□□ -1.61
RPRD1AQ96P16 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RPRD1AQ96P16 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 AL034370.1-201ENST00000397254 1590 ntBASIC5.01□□□□□ -1.61
RPRD1AQ96P16 AC009643.2-201ENST00000603543 1448 ntBASIC5.01□□□□□ -1.61
RPRD1AQ96P16 RNA5SP191-201ENST00000362585 102 ntBASIC5.01□□□□□ -1.61
RPRD1AQ96P16 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 AL035419.1-201ENST00000397037 564 ntBASIC5.01□□□□□ -1.61
RPRD1AQ96P16 MIR937-201ENST00000401271 86 ntBASIC5.01□□□□□ -1.61
RPRD1AQ96P16 RNA5SP345-201ENST00000410646 108 ntBASIC5.01□□□□□ -1.61
RPRD1AQ96P16 AC104333.2-201ENST00000422630 192 ntBASIC5.01□□□□□ -1.61
RPRD1AQ96P16 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.01□□□□□ -1.61
RPRD1AQ96P16 SBDSP1-204ENST00000453858 737 ntBASIC5.01□□□□□ -1.61
RPRD1AQ96P16 AL356981.1-201ENST00000454879 684 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms