Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 SEPT7P7-201ENST00000420492 1301 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 RNA5SP234-201ENST00000363916 119 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 RN7SKP81-201ENST00000365603 331 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 MIR142-201ENST00000384835 87 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 RNA5SP296-201ENST00000410523 111 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 NAP1L4P2-201ENST00000425958 899 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 RPS27AP6-201ENST00000427962 448 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 FO393419.3-201ENST00000428741 282 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AL389925.1-201ENST00000432257 728 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 ELOCP11-201ENST00000436690 332 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 ELOCP16-201ENST00000444494 332 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 MTND1P33-201ENST00000446251 917 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 Z95152.1-201ENST00000453556 656 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC023141.9-201ENST00000458734 412 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 RPL5P22-201ENST00000480199 884 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC005412.2-201ENST00000492004 341 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 IGBP1P4-201ENST00000503202 879 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC021146.5-201ENST00000503544 545 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AP004607.2-201ENST00000533949 322 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 OR8K4P-201ENST00000534608 872 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 SNORD95-201ENST00000579879 68 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC073387.2-201ENST00000604797 784 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC000068.2-201ENST00000608816 460 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC244107.2-201ENST00000611773 76 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AL162574.1-201ENST00000615702 950 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 AC109583.2-201ENST00000617367 129 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 SOCS5P3-201ENST00000425115 1576 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AP000473.2-201ENST00000602659 1537 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC093775.1-201ENST00000624154 1868 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 RNU5B-1-201ENST00000363286 116 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 RNA5SP242-201ENST00000364171 118 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 RN7SKP69-201ENST00000365390 305 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 RNU6-244P-201ENST00000391028 104 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 DBIP1-201ENST00000401435 260 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AL133388.1-201ENST00000404509 287 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 HMGB1P13-201ENST00000406019 642 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 OR51B3P-201ENST00000412287 913 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 SSR1P2-201ENST00000415208 787 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC090018.1-201ENST00000434369 367 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC000041.1-201ENST00000439655 175 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 NPM1P19-201ENST00000450070 712 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC096741.1-201ENST00000472250 846 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC021193.1-201ENST00000511607 420 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 IGLVIV-64-201ENST00000518581 301 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 EEF1A1P37-201ENST00000522748 715 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms