Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC087468.1-201ENST00000604365 630 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 MIR6780A-201ENST00000615089 68 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC022960.2-201ENST00000616300 666 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC015914.2-201ENST00000618167 288 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 MIR6853-201ENST00000619642 74 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC012414.7-202ENST00000622705 1090 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC138627.1-204ENST00000641894 765 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 AC021242.1-201ENST00000507315 2035 ntBASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.8□□□□□ -1.64
ECHDC3Q96DC8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 DDX18P5-201ENST00000534547 1306 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RNU6-729P-201ENST00000384399 107 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 ARL4AP5-201ENST00000404372 599 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RN7SKP97-201ENST00000410966 333 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RGS17P1-201ENST00000423358 553 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 OR5M12P-201ENST00000423388 929 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC107015.1-201ENST00000466902 747 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC006967.1-201ENST00000467608 589 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 TRBV8-1-201ENST00000481590 279 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC063949.1-201ENST00000552900 865 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 CYCSP40-201ENST00000575927 294 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RN7SL690P-201ENST00000582087 240 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC098935.2-201ENST00000604222 466 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC096586.2-201ENST00000610260 441 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 MFSD8-216ENST00000641147 4009 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 DHX9P1-201ENST00000436565 3076 ntBASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.79□□□□□ -1.64
ECHDC3Q96DC8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 RNU6-167P-201ENST00000384292 106 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AL590762.2-201ENST00000395798 571 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AL590139.1-201ENST00000416267 400 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 FABP7P1-201ENST00000424004 391 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 EIF4HP2-201ENST00000424380 563 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 CKS1BP6-201ENST00000424932 240 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AC016831.4-201ENST00000438302 307 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 SERPINA7P1-201ENST00000443077 631 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 FKBP1BP1-201ENST00000553366 325 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AL390726.5-202ENST00000564800 256 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AC233702.9-201ENST00000581528 203 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AL121890.2-201ENST00000617644 465 ntBASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.78□□□□□ -1.64
ECHDC3Q96DC8 AL121950.1-201ENST00000624993 2077 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC027228.2-201ENST00000567141 2154 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC097461.1-201ENST00000568928 2821 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC079741.1-201ENST00000321498 212 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms