Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC168Q8NDH2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AC138907.8-201ENST00000623981 2256 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 SNORA48.4-201ENST00000391089 134 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 OR1F12-201ENST00000402365 945 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 CRYBB2P1-203ENST00000415709 538 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 PDSS1P1-201ENST00000422953 1114 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AL050321.1-201ENST00000432363 400 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 RN7SL189P-201ENST00000468631 289 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AC091979.2-201ENST00000607514 214 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AL356608.1-201ENST00000610034 820 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AC091953.5-201ENST00000622919 233 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AL590704.1-201ENST00000402856 794 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 EIF4A1P3-201ENST00000411521 244 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 HMGB3P5-201ENST00000428894 612 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AP003730.1-201ENST00000524605 285 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 MIR4301-201ENST00000577203 66 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AC100847.1-201ENST00000611316 481 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 AL356121.2-201ENST00000624715 780 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.95□□□□□ -1.78
CCDC168Q8NDH2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 ATP5HP3-201ENST00000396994 486 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 ARL4AP5-201ENST00000404372 599 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 RN7SKP267-201ENST00000410381 285 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AC023818.1-201ENST00000498379 384 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 SRGNP1-201ENST00000603392 451 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 FAM27B-201ENST00000610601 213 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 OR14L1P-202ENST00000641545 3009 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 RPL19P16-201ENST00000433839 588 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AL352984.2-202ENST00000613699 155 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 AC020978.9-201ENST00000624380 1141 ntBASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC168Q8NDH2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms