Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL022067.1-201ENST00000602426 454 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL450336.1-201ENST00000605180 586 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 RN7SL787P-201ENST00000613000 284 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC079395.3-201ENST00000615161 484 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL122125.1-201ENST00000616999 600 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC120349.3-201ENST00000624377 529 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC132825.7-201ENST00000638744 335 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 STX3-208ENST00000641815 3236 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 MTCO1P15-201ENST00000529569 1526 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 TRIM51GP-201ENST00000534741 1350 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 OR9G4-201ENST00000302957 984 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 SNORA48.4-201ENST00000391089 134 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 GSTA12P-201ENST00000402398 508 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AL359643.1-201ENST00000404109 423 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 SNORA11.5-201ENST00000408163 128 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 MIR1271-201ENST00000408537 86 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AL592310.1-201ENST00000414330 671 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 HIGD1AP15-201ENST00000416198 280 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 XKRYP1-201ENST00000423438 492 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 DSTNP5-201ENST00000427921 523 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC124944.2-201ENST00000429866 1242 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 KCTD9P1-201ENST00000430462 1167 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 XKRYP2-201ENST00000432915 492 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC046176.1-201ENST00000435260 1170 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AL591719.1-201ENST00000444669 744 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 HMGN1P36-201ENST00000446623 298 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 NOP56P2-201ENST00000447491 769 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 RANP1-206ENST00000455094 651 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 RPL21P18-201ENST00000469899 480 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC090638.1-201ENST00000498296 909 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 RNU6-276P-201ENST00000516114 96 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 BUD31P1-201ENST00000521828 359 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC015720.2-201ENST00000567709 334 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 MTCYBP13-201ENST00000578634 1093 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC005412.1-201ENST00000580812 1049 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC124283.4-201ENST00000581815 456 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 VN1R87P-201ENST00000596706 487 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC022022.2-201ENST00000602989 360 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 FO393422.1-201ENST00000603908 708 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC000068.2-201ENST00000608816 460 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC109583.2-201ENST00000617367 129 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC006927.2-201ENST00000639256 389 ntBASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP4Q8N3C7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 RNA5SP234-201ENST00000363916 119 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms