Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71Q8IV32 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71Q8IV32 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71Q8IV32 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC013429.2-201ENST00000418798 781 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC012519.1-201ENST00000424588 610 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 RPS3AP53-201ENST00000454716 778 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC022336.1-201ENST00000475510 337 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 ENPP7P9-201ENST00000514456 627 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 SEC11B-201ENST00000518383 499 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 OR5AZ1P-201ENST00000527448 943 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 CR383656.6-201ENST00000550518 394 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AL358913.1-201ENST00000554342 121 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AL121839.1-201ENST00000556233 1185 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC011447.4-201ENST00000587562 111 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC005252.1-201ENST00000604518 1063 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 BNIP3P35-201ENST00000604530 490 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC087783.2-201ENST00000605070 562 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AP005432.2-201ENST00000608162 586 ntBASIC4.69□□□□□ -1.66
CCDC71Q8IV32 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71Q8IV32 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC120338.1-201ENST00000625074 1541 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 SCARNA15-201ENST00000607520 4325 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 SNURFL-201ENST00000309296 343 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RN7SKP104-201ENST00000362605 328 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AL445528.1-201ENST00000426330 420 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 MTCO1P51-201ENST00000427672 1060 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AL590623.1-201ENST00000427864 105 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RAB28P3-201ENST00000448325 597 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AL500527.1-201ENST00000448532 255 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RN7SL860P-201ENST00000473738 223 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC007686.1-201ENST00000488511 463 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC105233.1-201ENST00000498840 781 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 HMGB1P19-201ENST00000517578 577 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AP002981.1-201ENST00000517692 975 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC093799.2-201ENST00000610062 578 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AP001005.3-201ENST00000622049 129 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms