Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC079395.2-201ENST00000610982 737 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 GTF2H2B-203ENST00000508065 1432 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC000374.1-201ENST00000434698 1745 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC090971.4-201ENST00000560291 1800 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC104623.2-202ENST00000623477 4002 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 METTL21EP-201ENST00000298105 713 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 MIR323A-201ENST00000362199 86 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 RN7SKP74-201ENST00000362849 309 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 SNORA51.1-201ENST00000363243 140 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 RNA5SP90-201ENST00000364801 99 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AL353692.2-201ENST00000407054 335 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 RNU2-72P-201ENST00000411175 163 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC013404.1-201ENST00000413068 249 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 XKRYP4-201ENST00000414395 483 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC073508.1-201ENST00000428866 656 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC009238.2-201ENST00000431026 355 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 CFL1P1-202ENST00000432948 411 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 XKRYP5-201ENST00000449659 483 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 BX842559.2-201ENST00000451418 605 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 RPL7P40-201ENST00000481703 745 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 NPM1P29-201ENST00000483112 803 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 UBA52P7-201ENST00000486088 380 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 RPS4XP20-201ENST00000505751 772 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 SNORA26.10-201ENST00000516427 141 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 SNORA31.13-201ENST00000516624 135 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AP006245.2-201ENST00000522004 300 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC013701.1-201ENST00000522657 465 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 OR8A2P-201ENST00000528631 952 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 IMMP1LP3-201ENST00000604197 224 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AP005432.2-201ENST00000608162 586 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC108359.1-201ENST00000616451 1211 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 TMEM30CP-203ENST00000637814 1035 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AL049767.1-202ENST00000637826 242 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 CASC19-264ENST00000641912 1184 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC100778.3-201ENST00000580060 1750 ntBASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NHLRC1Q6VVB1 AC092747.4-201ENST00000620519 1861 ntBASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 SMG1P4-204ENST00000523028 4131 ntBASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NHLRC1Q6VVB1 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms