Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LPCAT4Q643R3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LPCAT4Q643R3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LPCAT4Q643R3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LPCAT4Q643R3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LPCAT4Q643R3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
LPCAT4Q643R3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LPCAT4Q643R3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 ATG4AP1-201ENST00000416893 538 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 CYCSP12-201ENST00000437729 300 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AP000281.1-201ENST00000444036 316 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AL161636.2-201ENST00000445179 927 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC009127.1-201ENST00000467090 155 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 IFITM8P-201ENST00000522529 394 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 OR10G5P-201ENST00000532733 358 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC022404.1-201ENST00000555320 273 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC091178.1-203ENST00000584586 279 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC133552.5-201ENST00000604266 540 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC109309.2-201ENST00000612597 332 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AL138721.1-201ENST00000616756 179 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AL450326.2-201ENST00000421913 1962 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.39□□□□□ -1.71
LPCAT4Q643R3 AC107021.2-201ENST00000567714 2095 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 SMG1P6-201ENST00000532337 2930 ntBASIC4.39□□□□□ -1.71
LPCAT4Q643R3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC018529.3-201ENST00000624212 2254 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 RNA5SP22-201ENST00000365393 109 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 HMGB3P7-201ENST00000400214 611 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AL590609.2-201ENST00000421430 368 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 CENPIP1-201ENST00000425713 902 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 NANOGP6-201ENST00000429190 847 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC002069.1-201ENST00000429649 1159 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC079807.1-201ENST00000429993 481 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 OR7E125P-201ENST00000443450 846 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 RPL31P15-201ENST00000449770 338 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 RN7SL97P-201ENST00000486780 299 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 RPS6P4-201ENST00000494693 758 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC015795.1-201ENST00000513669 327 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 TVP23CP2-201ENST00000571473 623 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 HMGB2P1-201ENST00000591146 634 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AL133406.3-201ENST00000606817 541 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC020634.1-201ENST00000608701 549 ntBASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.38□□□□□ -1.71
LPCAT4Q643R3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LPCAT4Q643R3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LPCAT4Q643R3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.37□□□□□ -1.71
LPCAT4Q643R3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LPCAT4Q643R3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms