Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RN7SL254P-201ENST00000460609 284 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC117394.1-201ENST00000477323 567 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 RPL29P23-201ENST00000486188 442 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 RN7SL568P-201ENST00000493069 298 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC084024.2-201ENST00000503480 791 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC113367.2-201ENST00000505749 160 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 SEPT10P1-201ENST00000517342 1162 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 IGLV3-24-201ENST00000517477 197 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 MRPS36P3-201ENST00000519284 130 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC092747.2-201ENST00000545069 983 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL163952.1-202ENST00000569625 600 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 MIR3936-201ENST00000584304 110 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC091057.2-201ENST00000602594 792 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL513327.3-201ENST00000602618 469 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC005479.3-201ENST00000602790 431 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC011453.2-201ENST00000603737 729 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC025811.1-201ENST00000604312 472 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL355816.1-201ENST00000607951 118 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC010632.3-201ENST00000611377 369 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 uc_338.26-201ENST00000612659 160 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 FAM27E2-201ENST00000619668 403 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL035661.1-201ENST00000620459 1144 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL390318.1-201ENST00000624564 687 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 CR392039.4-201ENST00000624968 501 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 GNL2P1-201ENST00000451274 2190 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC027228.2-201ENST00000567141 2154 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 NACA3P-201ENST00000359690 648 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 RNU1-134P-201ENST00000362935 165 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 MIR92A2-201ENST00000385299 75 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC093719.1-202ENST00000392735 373 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 YWHAZP6-201ENST00000399764 738 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 OR51A3P-201ENST00000413596 924 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 BMS1P13-201ENST00000417301 885 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 CRIP1P1-201ENST00000427567 185 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 MTCO1P3-201ENST00000429327 192 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 ELOCP10-201ENST00000440624 327 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 PPIAP7-201ENST00000454070 489 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL603882.1-201ENST00000463059 681 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 RPL35AP19-201ENST00000469425 329 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 MAST4-IT1-201ENST00000514241 658 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AP000620.1-201ENST00000527147 504 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC090424.1-201ENST00000535243 736 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 MRPS21P8-201ENST00000569196 235 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 MIR3912-201ENST00000577566 105 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms