Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 HSPD1P14-201ENST00000432666 1618 ntBASIC4.46□□□□□ -1.69
RFX4Q33E94 AC008758.3-201ENST00000507003 1829 ntBASIC4.46□□□□□ -1.69
RFX4Q33E94 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
RFX4Q33E94 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFX4Q33E94 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.46□□□□□ -1.7
RFX4Q33E94 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.46□□□□□ -1.7
RFX4Q33E94 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.46□□□□□ -1.7
RFX4Q33E94 AC017104.4-201ENST00000636283 1592 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFX4Q33E94 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RFX4Q33E94 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFX4Q33E94 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.46□□□□□ -1.7
RFX4Q33E94 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.46□□□□□ -1.7
RFX4Q33E94 AC004690.1-201ENST00000418216 328 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.46□□□□□ -1.7
RFX4Q33E94 OR2X1P-201ENST00000421144 687 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 Z74021.1-201ENST00000423610 407 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.46□□□□□ -1.7
RFX4Q33E94 TRGV7-201ENST00000427089 353 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AC005033.1-201ENST00000428904 813 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 OR52B5P-201ENST00000435337 951 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RFX4Q33E94 OR7E125P-201ENST00000443450 846 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.46□□□□□ -1.7
RFX4Q33E94 MTND4LP12-201ENST00000448237 295 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.46□□□□□ -1.7
RFX4Q33E94 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.46□□□□□ -1.7
RFX4Q33E94 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFX4Q33E94 RPS4XP1-201ENST00000482189 787 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 RN7SL101P-201ENST00000496350 279 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AC113398.2-201ENST00000507630 558 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFX4Q33E94 IGKV2-18-201ENST00000522607 343 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.46□□□□□ -1.7
RFX4Q33E94 AC107918.3-201ENST00000533272 382 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.46□□□□□ -1.7
RFX4Q33E94 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.46□□□□□ -1.7
RFX4Q33E94 TVP23CP2-201ENST00000571473 623 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AC011445.2-201ENST00000599274 173 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 RPL7P50-201ENST00000600588 727 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AC105254.2-201ENST00000603636 436 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AC133552.5-201ENST00000604266 540 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AL008729.2-201ENST00000606393 473 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AL133406.3-201ENST00000606817 541 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 NF1P10-201ENST00000613227 742 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.46□□□□□ -1.7
RFX4Q33E94 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.46□□□□□ -1.7
RFX4Q33E94 OR52B5P-202ENST00000641118 1110 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RFX4Q33E94 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFX4Q33E94 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFX4Q33E94 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.46□□□□□ -1.7
RFX4Q33E94 IRF5P1-201ENST00000504852 2164 ntBASIC4.46□□□□□ -1.7
RFX4Q33E94 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFX4Q33E94 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFX4Q33E94 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RFX4Q33E94 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RFX4Q33E94 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFX4Q33E94 CASC19-281ENST00000642118 1554 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFX4Q33E94 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX4Q33E94 RN7SKP162-201ENST00000363605 345 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.45□□□□□ -1.7
RFX4Q33E94 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RFX4Q33E94 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
RFX4Q33E94 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.45□□□□□ -1.7
RFX4Q33E94 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.45□□□□□ -1.7
RFX4Q33E94 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.45□□□□□ -1.7
RFX4Q33E94 DDX39BP1-205ENST00000422507 192 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC093414.1-201ENST00000434712 514 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC092647.2-201ENST00000452998 253 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 EIF2S2P5-201ENST00000457635 968 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 PSMC1P13-201ENST00000458195 985 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 ATP5G1P3-201ENST00000463301 410 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 RPS26P28-201ENST00000470806 348 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 AC012158.1-204ENST00000483430 465 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 RN7SL244P-201ENST00000493405 297 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 AC024558.1-201ENST00000505008 528 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX4Q33E94 IMMP1LP3-201ENST00000604197 224 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.45□□□□□ -1.7
RFX4Q33E94 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC011815.3-201ENST00000624194 473 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 AC087190.4-201ENST00000574616 8334 ntBASIC4.45□□□□□ -1.7
RFX4Q33E94 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.45□□□□□ -1.7
RFX4Q33E94 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFX4Q33E94 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RFX4Q33E94 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RFX4Q33E94 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.44□□□□□ -1.7
RFX4Q33E94 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFX4Q33E94 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms