Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CENPIP1-201ENST00000425713 902 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AL732292.1-201ENST00000426692 226 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.54□□□□□ -1.52
GABPAQ06546 TPTE2P1-204ENST00000435256 593 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 H2AFZP5-201ENST00000446960 382 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.54□□□□□ -1.52
GABPAQ06546 AC025674.1-201ENST00000507074 324 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AC007016.1-201ENST00000512110 244 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AC025857.1-201ENST00000525252 377 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.54□□□□□ -1.52
GABPAQ06546 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.54□□□□□ -1.52
GABPAQ06546 TRAV11-201ENST00000539512 339 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 MTND2P17-201ENST00000550281 688 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GABPAQ06546 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.54□□□□□ -1.52
GABPAQ06546 RPL12P25-202ENST00000598100 674 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AC093765.1-201ENST00000603758 881 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.54□□□□□ -1.52
GABPAQ06546 AL713998.2-201ENST00000604538 1198 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AC100847.1-201ENST00000611316 481 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AC083809.1-201ENST00000615051 472 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AC105105.5-201ENST00000622635 1294 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AC012414.7-202ENST00000622705 1090 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
GABPAQ06546 AL137100.1-201ENST00000556703 1620 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 MAPK10-263ENST00000641052 4307 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.54□□□□□ -1.52
GABPAQ06546 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GABPAQ06546 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
GABPAQ06546 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.54□□□□□ -1.52
GABPAQ06546 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
GABPAQ06546 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.54□□□□□ -1.52
GABPAQ06546 AL513548.1-201ENST00000562904 1724 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GABPAQ06546 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.54□□□□□ -1.52
GABPAQ06546 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.53□□□□□ -1.52
GABPAQ06546 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 AL022322.2-201ENST00000624072 20397 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 OR56B2P-202ENST00000641377 2453 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.53□□□□□ -1.52
GABPAQ06546 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.53□□□□□ -1.52
GABPAQ06546 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.53□□□□□ -1.52
GABPAQ06546 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 AL121950.1-201ENST00000624993 2077 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 AC008549.2-201ENST00000333482 706 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 RNU4-39P-201ENST00000362455 127 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
GABPAQ06546 TMBIM7P-201ENST00000418074 855 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 AC117434.1-201ENST00000419971 836 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.53□□□□□ -1.52
GABPAQ06546 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.53□□□□□ -1.52
GABPAQ06546 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.53□□□□□ -1.52
GABPAQ06546 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.53□□□□□ -1.52
GABPAQ06546 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.53□□□□□ -1.52
GABPAQ06546 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
GABPAQ06546 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.53□□□□□ -1.52
GABPAQ06546 OR7L1P-201ENST00000456181 380 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.53□□□□□ -1.52
GABPAQ06546 SNORA26.10-201ENST00000516427 141 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.53□□□□□ -1.52
GABPAQ06546 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.53□□□□□ -1.52
GABPAQ06546 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.53□□□□□ -1.52
GABPAQ06546 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 AC084783.1-201ENST00000565846 910 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 AC008782.1-201ENST00000603386 430 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 AC115286.1-201ENST00000604298 434 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 AC073137.1-201ENST00000605636 634 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.53□□□□□ -1.52
GABPAQ06546 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.53□□□□□ -1.52
GABPAQ06546 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
GABPAQ06546 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GABPAQ06546 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GABPAQ06546 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.52□□□□□ -1.53
GABPAQ06546 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.52□□□□□ -1.53
GABPAQ06546 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
GABPAQ06546 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GABPAQ06546 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.52□□□□□ -1.53
GABPAQ06546 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GABPAQ06546 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GABPAQ06546 AL031119.1-201ENST00000404707 1879 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
GABPAQ06546 OR14L1P-202ENST00000641545 3009 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 AL034370.1-201ENST00000397254 1590 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GABPAQ06546 AC021146.4-201ENST00000309229 279 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 AC068538.1-201ENST00000376856 336 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 U3.22-201ENST00000391120 215 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 RAB28P1-201ENST00000411517 641 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.52□□□□□ -1.53
GABPAQ06546 BX119904.3-201ENST00000428194 957 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.52□□□□□ -1.53
GABPAQ06546 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.52□□□□□ -1.53
GABPAQ06546 AP001781.1-201ENST00000530977 207 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms