Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
NKX6-1P78426 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC011416.1-201ENST00000514947 1732 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC005725.1-201ENST00000577346 2607 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 RNU6-619P-201ENST00000365146 108 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 SNORD65.1-201ENST00000390889 71 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 U3.23-201ENST00000391132 200 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AL450992.3-201ENST00000413192 568 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC009784.1-201ENST00000426484 460 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX6-1P78426 PPIAP13-201ENST00000434706 478 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 YWHAZP7-201ENST00000436906 631 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AL354941.1-201ENST00000438600 464 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 MTND5P2-201ENST00000442927 1142 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 BMS1P10-201ENST00000443754 1120 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 RSL24D1P3-201ENST00000449255 495 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AL109741.2-201ENST00000455561 343 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 RANP2-201ENST00000456833 229 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AC005229.2-201ENST00000456995 399 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC015724.1-201ENST00000478577 156 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 GAPDHP36-201ENST00000480688 918 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX6-1P78426 snoU109.6-201ENST00000516831 118 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AP000859.1-201ENST00000525536 307 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC068714.1-201ENST00000559623 800 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.37□□□□□ -1.55
NKX6-1P78426 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC022467.1-201ENST00000614738 749 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AC023158.2-201ENST00000614876 543 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 TCL6_3.1-201ENST00000619064 137 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AC004943.3-201ENST00000624116 600 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AC068137.4-201ENST00000638485 296 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.37□□□□□ -1.55
NKX6-1P78426 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 AL591135.1-201ENST00000401578 5914 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NKX6-1P78426 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.37□□□□□ -1.55
NKX6-1P78426 SGO1P2-201ENST00000429458 1589 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 AP000776.1-201ENST00000530032 1663 ntBASIC5.37□□□□□ -1.55
NKX6-1P78426 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX6-1P78426 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms