Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNA1P78396 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNA1P78396 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNA1P78396 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNA1P78396 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNA1P78396 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CCNA1P78396 RNA5SP345-201ENST00000410646 108 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNA1P78396 PCNPP4-201ENST00000414817 517 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.55□□□□□ -1.52
CCNA1P78396 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNA1P78396 SCAND3P1-201ENST00000439854 1060 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 EIF2S2P2-201ENST00000447161 982 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 AC000111.2-201ENST00000448200 210 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNA1P78396 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNA1P78396 RNU2-30P-201ENST00000516209 141 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 Y_RNA.719-201ENST00000517156 106 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNA1P78396 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNA1P78396 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNA1P78396 AC025423.2-201ENST00000537570 439 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 AL121839.1-201ENST00000556233 1185 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 AP005119.2-201ENST00000579735 1105 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 SNORD39.2-201ENST00000579995 76 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNA1P78396 AC067838.1-201ENST00000606064 577 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNA1P78396 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCNA1P78396 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNA1P78396 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCNA1P78396 AC002525.1-201ENST00000624392 1622 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNA1P78396 AC139713.2-214ENST00000642059 1811 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CCNA1P78396 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
CCNA1P78396 STX3-208ENST00000641815 3236 ntBASIC5.55□□□□□ -1.52
CCNA1P78396 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNA1P78396 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNA1P78396 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCNA1P78396 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CCNA1P78396 AC108751.5-201ENST00000492880 1336 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 AC007382.1-201ENST00000624376 2618 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 MAPK10-338ENST00000641647 3362 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCNA1P78396 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCNA1P78396 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
CCNA1P78396 IGKV7-3-201ENST00000357453 298 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 RNA5SP397-201ENST00000391323 118 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 SNORA11-201ENST00000408789 128 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 ELOCP19-201ENST00000411919 318 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 ATG4AP1-201ENST00000416893 538 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.54□□□□□ -1.52
CCNA1P78396 AC073143.1-201ENST00000436316 395 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 Z95152.1-201ENST00000453556 656 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCNA1P78396 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNA1P78396 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.54□□□□□ -1.52
CCNA1P78396 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.54□□□□□ -1.52
CCNA1P78396 RN7SKP122-201ENST00000515923 296 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 AP001005.3-201ENST00000622049 129 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.54□□□□□ -1.52
CCNA1P78396 AL137100.1-201ENST00000556703 1620 ntBASIC5.54□□□□□ -1.52
CCNA1P78396 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCNA1P78396 AC068446.1-201ENST00000556425 1549 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCNA1P78396 AL592148.3-201ENST00000608771 2646 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNA1P78396 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.53□□□□□ -1.52
CCNA1P78396 RNU6-1263P-201ENST00000384601 106 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 GPS2P1-201ENST00000411761 986 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 VN1R31P-201ENST00000417498 730 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 RSL24D1P6-201ENST00000426934 401 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 RPS17P2-201ENST00000461663 408 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 AC013356.1-201ENST00000489027 564 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.53□□□□□ -1.52
CCNA1P78396 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.53□□□□□ -1.52
CCNA1P78396 AL049839.1-201ENST00000556151 657 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNA1P78396 RN7SL802P-201ENST00000577858 299 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 SNORA74C-1-201ENST00000580726 201 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNA1P78396 RPL12P25-202ENST00000598100 674 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 AC005191.1-201ENST00000603950 358 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 AC092653.1-201ENST00000608509 531 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 MIR6830-201ENST00000636015 70 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCNA1P78396 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNA1P78396 SOCS5P3-201ENST00000425115 1576 ntBASIC5.53□□□□□ -1.52
CCNA1P78396 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCNA1P78396 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms