Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
TPM4P67936 AC112255.1-201ENST00000624070 2493 ntBASIC5.23□□□□□ -1.57
TPM4P67936 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.23□□□□□ -1.57
TPM4P67936 AL590762.2-201ENST00000395798 571 ntBASIC5.23□□□□□ -1.57
TPM4P67936 OR3A2-201ENST00000408891 1076 ntBASIC5.23□□□□□ -1.57
TPM4P67936 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.23□□□□□ -1.57
TPM4P67936 AC114755.2-201ENST00000413520 361 ntBASIC5.23□□□□□ -1.57
TPM4P67936 GTF2IP5-201ENST00000414608 731 ntBASIC5.23□□□□□ -1.57
TPM4P67936 CFL1P1-202ENST00000432948 411 ntBASIC5.23□□□□□ -1.57
TPM4P67936 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.23□□□□□ -1.57
TPM4P67936 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM4P67936 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM4P67936 PSMC1P13-201ENST00000458195 985 ntBASIC5.23□□□□□ -1.57
TPM4P67936 AC023141.9-201ENST00000458734 412 ntBASIC5.23□□□□□ -1.57
TPM4P67936 RN7SL741P-201ENST00000482473 289 ntBASIC5.23□□□□□ -1.57
TPM4P67936 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM4P67936 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM4P67936 MTATP6P1-201ENST00000514057 681 ntBASIC5.23□□□□□ -1.57
TPM4P67936 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.23□□□□□ -1.57
TPM4P67936 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.23□□□□□ -1.57
TPM4P67936 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
TPM4P67936 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TPM4P67936 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM4P67936 AL627230.1-201ENST00000613077 211 ntBASIC5.23□□□□□ -1.57
TPM4P67936 AL591926.8-201ENST00000616876 211 ntBASIC5.23□□□□□ -1.57
TPM4P67936 LINC00901.1-201ENST00000617252 152 ntBASIC5.23□□□□□ -1.57
TPM4P67936 MAPK10-263ENST00000641052 4307 ntBASIC5.23□□□□□ -1.57
TPM4P67936 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TPM4P67936 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM4P67936 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
TPM4P67936 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM4P67936 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM4P67936 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TPM4P67936 A2MP1-204ENST00000566278 4130 ntBASIC5.23□□□□□ -1.57
TPM4P67936 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM4P67936 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TPM4P67936 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TPM4P67936 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM4P67936 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TPM4P67936 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 SNORA17A-201ENST00000391185 133 ntBASIC5.22□□□□□ -1.57
TPM4P67936 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 AP002530.1-201ENST00000405705 684 ntBASIC5.22□□□□□ -1.57
TPM4P67936 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.22□□□□□ -1.57
TPM4P67936 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.22□□□□□ -1.57
TPM4P67936 BMS1P13-201ENST00000417301 885 ntBASIC5.22□□□□□ -1.57
TPM4P67936 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 RPL21P43-201ENST00000425440 472 ntBASIC5.22□□□□□ -1.57
TPM4P67936 AC005033.1-201ENST00000428904 813 ntBASIC5.22□□□□□ -1.57
TPM4P67936 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 AC090142.1-201ENST00000465776 462 ntBASIC5.22□□□□□ -1.57
TPM4P67936 RPS26P28-201ENST00000470806 348 ntBASIC5.22□□□□□ -1.57
TPM4P67936 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM4P67936 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.22□□□□□ -1.57
TPM4P67936 BUD31P1-201ENST00000521828 359 ntBASIC5.22□□□□□ -1.57
TPM4P67936 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM4P67936 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.22□□□□□ -1.57
TPM4P67936 AC092490.3-201ENST00000545370 572 ntBASIC5.22□□□□□ -1.57
TPM4P67936 AC133555.2-201ENST00000550213 292 ntBASIC5.22□□□□□ -1.57
TPM4P67936 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM4P67936 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM4P67936 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.22□□□□□ -1.57
TPM4P67936 SNORD95-201ENST00000579879 68 ntBASIC5.22□□□□□ -1.57
TPM4P67936 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM4P67936 AP001521.2-201ENST00000608772 546 ntBASIC5.22□□□□□ -1.57
TPM4P67936 SNORA17.5-201ENST00000630429 132 ntBASIC5.22□□□□□ -1.57
TPM4P67936 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TPM4P67936 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TPM4P67936 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM4P67936 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TPM4P67936 AL031119.1-201ENST00000404707 1879 ntBASIC5.22□□□□□ -1.57
TPM4P67936 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TPM4P67936 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.22□□□□□ -1.57
TPM4P67936 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM4P67936 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
TPM4P67936 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TPM4P67936 AC107977.1-201ENST00000355745 939 ntBASIC5.21□□□□□ -1.58
TPM4P67936 MIR323A-201ENST00000362199 86 ntBASIC5.21□□□□□ -1.58
TPM4P67936 U3.36-201ENST00000408418 213 ntBASIC5.21□□□□□ -1.58
TPM4P67936 RN7SKP216-201ENST00000411050 312 ntBASIC5.21□□□□□ -1.58
TPM4P67936 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM4P67936 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM4P67936 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM4P67936 FAR2P1-206ENST00000449736 709 ntBASIC5.21□□□□□ -1.58
TPM4P67936 RBMY2TP-201ENST00000451162 947 ntBASIC5.21□□□□□ -1.58
TPM4P67936 RPL23AP56-201ENST00000460778 453 ntBASIC5.21□□□□□ -1.58
TPM4P67936 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM4P67936 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.21□□□□□ -1.58
TPM4P67936 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.21□□□□□ -1.58
TPM4P67936 SNRPCP2-201ENST00000504370 475 ntBASIC5.21□□□□□ -1.58
TPM4P67936 AC024558.1-201ENST00000505008 528 ntBASIC5.21□□□□□ -1.58
TPM4P67936 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM4P67936 RNA5SP362-201ENST00000516048 118 ntBASIC5.21□□□□□ -1.58
TPM4P67936 AC100770.1-201ENST00000532310 322 ntBASIC5.21□□□□□ -1.58
TPM4P67936 DYNLL1P4-201ENST00000549314 266 ntBASIC5.21□□□□□ -1.58
TPM4P67936 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms