Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
GTF2A1P52655 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
GTF2A1P52655 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 AL136164.3-201ENST00000624429 3978 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC092162.3-201ENST00000624511 1624 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.62□□□□□ -1.67
GTF2A1P52655 XIAPP3-201ENST00000312918 795 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 RNU4-2-201ENST00000365668 141 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 TRAV35-201ENST00000390462 330 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 HSPA8P15-201ENST00000401676 786 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 AL133388.1-201ENST00000404509 287 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 RHEBP3-201ENST00000411920 351 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 OR6K4P-201ENST00000423179 955 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 AC069154.1-201ENST00000432914 542 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 FMO7P-201ENST00000436045 768 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 AC073052.1-201ENST00000440417 714 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 EEF1B2P6-201ENST00000445713 673 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 AC104634.1-201ENST00000452720 462 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.62□□□□□ -1.67
GTF2A1P52655 RN7SL612P-201ENST00000497704 295 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.62□□□□□ -1.67
GTF2A1P52655 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC078878.1-201ENST00000539832 958 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC026826.3-201ENST00000561747 158 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 AC005341.1-201ENST00000571086 708 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.62□□□□□ -1.67
GTF2A1P52655 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.62□□□□□ -1.67
GTF2A1P52655 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC132068.1-201ENST00000623805 459 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
GTF2A1P52655 MIR193BHG-214ENST00000641765 509 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.62□□□□□ -1.67
GTF2A1P52655 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.62□□□□□ -1.67
GTF2A1P52655 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 AC106872.5-201ENST00000508856 1416 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GTF2A1P52655 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
GTF2A1P52655 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.62□□□□□ -1.67
GTF2A1P52655 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.62□□□□□ -1.67
GTF2A1P52655 AC009951.1-201ENST00000623674 2614 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GTF2A1P52655 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 AC007529.1-201ENST00000418574 2178 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GTF2A1P52655 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 RN7SKP269-201ENST00000365545 319 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 RPL7P53-201ENST00000421245 739 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.61□□□□□ -1.67
GTF2A1P52655 CDY8P-201ENST00000428380 1279 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 AC092162.1-201ENST00000432828 434 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AL161722.2-201ENST00000434731 981 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AL353597.2-202ENST00000434901 373 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 AL163193.1-201ENST00000444895 788 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 CDY20P-201ENST00000447528 1279 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AC073476.1-201ENST00000452854 407 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AC118758.1-202ENST00000454719 225 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF2A1P52655 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.61□□□□□ -1.67
GTF2A1P52655 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF2A1P52655 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF2A1P52655 YWHABP2-201ENST00000540201 713 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.61□□□□□ -1.67
GTF2A1P52655 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF2A1P52655 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GTF2A1P52655 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF2A1P52655 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GTF2A1P52655 AP001496.3-201ENST00000580230 913 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF2A1P52655 AC005252.1-201ENST00000604518 1063 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AL034351.1-201ENST00000605288 668 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AC008115.3-201ENST00000614874 549 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AC118658.2-201ENST00000618697 459 ntBASIC4.61□□□□□ -1.67
GTF2A1P52655 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.61□□□□□ -1.67
GTF2A1P52655 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GTF2A1P52655 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
GTF2A1P52655 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.61□□□□□ -1.67
GTF2A1P52655 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
GTF2A1P52655 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GTF2A1P52655 AL049555.1-201ENST00000562834 1933 ntBASIC4.6□□□□□ -1.67
GTF2A1P52655 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.6□□□□□ -1.67
GTF2A1P52655 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
GTF2A1P52655 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.6□□□□□ -1.67
GTF2A1P52655 OR52B3P-201ENST00000314715 928 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms