Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL356490.1-201ENST00000623079 479 ntBASIC5.05□□□□□ -1.6
CDH3P22223 AC099494.2-201ENST00000623371 978 ntBASIC5.05□□□□□ -1.6
CDH3P22223 AC135068.12-201ENST00000637370 931 ntBASIC5.05□□□□□ -1.6
CDH3P22223 CASC19-222ENST00000641321 1173 ntBASIC5.05□□□□□ -1.6
CDH3P22223 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDH3P22223 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH3P22223 NXF4-202ENST00000416098 1465 ntBASIC5.05□□□□□ -1.6
CDH3P22223 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CDH3P22223 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH3P22223 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CDH3P22223 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH3P22223 AC007996.1-201ENST00000620414 2821 ntBASIC5.05□□□□□ -1.6
CDH3P22223 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CDH3P22223 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 AL034370.1-201ENST00000397254 1590 ntBASIC5.04□□□□□ -1.6
CDH3P22223 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH3P22223 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDH3P22223 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 AC000123.3-201ENST00000624029 4975 ntBASIC5.04□□□□□ -1.6
CDH3P22223 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH3P22223 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH3P22223 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 Y_RNA.110-201ENST00000363220 99 ntBASIC5.04□□□□□ -1.6
CDH3P22223 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH3P22223 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 RNF19BPX-201ENST00000426224 625 ntBASIC5.04□□□□□ -1.6
CDH3P22223 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 AL161722.2-201ENST00000434731 981 ntBASIC5.04□□□□□ -1.6
CDH3P22223 CLUHP1-201ENST00000435012 1190 ntBASIC5.04□□□□□ -1.6
CDH3P22223 AC099063.2-201ENST00000446360 662 ntBASIC5.04□□□□□ -1.6
CDH3P22223 AL035551.1-201ENST00000446931 348 ntBASIC5.04□□□□□ -1.6
CDH3P22223 STRADBP1-201ENST00000478954 1281 ntBASIC5.04□□□□□ -1.6
CDH3P22223 RPL21P6-201ENST00000479171 504 ntBASIC5.04□□□□□ -1.6
CDH3P22223 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH3P22223 AC108157.1-201ENST00000510511 539 ntBASIC5.04□□□□□ -1.6
CDH3P22223 RNA5SP464-201ENST00000516251 108 ntBASIC5.04□□□□□ -1.6
CDH3P22223 AC134349.2-201ENST00000535136 910 ntBASIC5.04□□□□□ -1.6
CDH3P22223 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH3P22223 AC092490.3-201ENST00000545370 572 ntBASIC5.04□□□□□ -1.6
CDH3P22223 BNIP3P1-201ENST00000547295 580 ntBASIC5.04□□□□□ -1.6
CDH3P22223 AC087763.1-201ENST00000603391 286 ntBASIC5.04□□□□□ -1.6
CDH3P22223 OR4H6P-202ENST00000603819 340 ntBASIC5.04□□□□□ -1.6
CDH3P22223 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CDH3P22223 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDH3P22223 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH3P22223 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH3P22223 DDX6P1-205ENST00000441966 1436 ntBASIC5.04□□□□□ -1.6
CDH3P22223 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH3P22223 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH3P22223 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CDH3P22223 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH3P22223 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH3P22223 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CDH3P22223 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH3P22223 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH3P22223 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH3P22223 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH3P22223 U3.3-201ENST00000362986 216 ntBASIC5.03□□□□□ -1.6
CDH3P22223 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH3P22223 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH3P22223 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH3P22223 RNU1-106P-201ENST00000384382 164 ntBASIC5.03□□□□□ -1.6
CDH3P22223 RNA5SP105-201ENST00000391123 113 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AL645927.1-201ENST00000396783 406 ntBASIC5.03□□□□□ -1.6
CDH3P22223 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH3P22223 AC073136.2-201ENST00000417282 849 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH3P22223 AC093162.1-201ENST00000419682 124 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AC124944.2-201ENST00000429866 1242 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH3P22223 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH3P22223 GAPDHP58-201ENST00000438477 1006 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH3P22223 MTND2P25-201ENST00000449028 610 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AC073850.1-201ENST00000449243 255 ntBASIC5.03□□□□□ -1.6
CDH3P22223 RN7SL189P-201ENST00000468631 289 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AP000797.2-201ENST00000475768 606 ntBASIC5.03□□□□□ -1.6
CDH3P22223 NIP7P2-201ENST00000485801 544 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AC004453.1-201ENST00000487895 408 ntBASIC5.03□□□□□ -1.6
CDH3P22223 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH3P22223 RN7SL808P-201ENST00000496066 299 ntBASIC5.03□□□□□ -1.6
CDH3P22223 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH3P22223 RPS24P16-201ENST00000497294 392 ntBASIC5.03□□□□□ -1.6
CDH3P22223 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH3P22223 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH3P22223 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH3P22223 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH3P22223 AC138938.1-201ENST00000515431 782 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AC067904.2-201ENST00000517322 1283 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AC092709.1-201ENST00000521355 1045 ntBASIC5.03□□□□□ -1.6
CDH3P22223 OR4V1P-201ENST00000525394 1140 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH3P22223 AC006349.1-201ENST00000555526 235 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH3P22223 MIMT1-201ENST00000597105 1050 ntBASIC5.03□□□□□ -1.6
CDH3P22223 AL445222.1-201ENST00000607259 628 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms