Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL6A2P12110 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.01□□□□□ -1.45
COL6A2P12110 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 AC005832.2-201ENST00000538921 1430 ntBASIC6□□□□□ -1.45
COL6A2P12110 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6□□□□□ -1.45
COL6A2P12110 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL6A2P12110 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL6A2P12110 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL6A2P12110 VDAC2P1-201ENST00000399358 958 ntBASIC6□□□□□ -1.45
COL6A2P12110 AL663109.1-201ENST00000411498 844 ntBASIC6□□□□□ -1.45
COL6A2P12110 AC019050.1-201ENST00000418508 492 ntBASIC6□□□□□ -1.45
COL6A2P12110 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6□□□□□ -1.45
COL6A2P12110 RNGTTP1-201ENST00000420965 728 ntBASIC6□□□□□ -1.45
COL6A2P12110 Z99497.1-201ENST00000421282 135 ntBASIC6□□□□□ -1.45
COL6A2P12110 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 RPL5P10-201ENST00000445207 894 ntBASIC6□□□□□ -1.45
COL6A2P12110 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL6A2P12110 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 RN7SL552P-201ENST00000462094 276 ntBASIC6□□□□□ -1.45
COL6A2P12110 RN7SL39P-201ENST00000462264 297 ntBASIC6□□□□□ -1.45
COL6A2P12110 SRRM1P2-201ENST00000464531 1192 ntBASIC6□□□□□ -1.45
COL6A2P12110 AC037198.2-201ENST00000478845 733 ntBASIC6□□□□□ -1.45
COL6A2P12110 AC073522.1-201ENST00000483312 377 ntBASIC6□□□□□ -1.45
COL6A2P12110 AC091544.1-201ENST00000484702 348 ntBASIC6□□□□□ -1.45
COL6A2P12110 AL024509.2-201ENST00000493462 493 ntBASIC6□□□□□ -1.45
COL6A2P12110 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 RNA5SP206-201ENST00000516703 121 ntBASIC6□□□□□ -1.45
COL6A2P12110 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 OR4C2P-201ENST00000530855 1064 ntBASIC6□□□□□ -1.45
COL6A2P12110 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6□□□□□ -1.45
COL6A2P12110 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 EIF1P4-201ENST00000572664 335 ntBASIC6□□□□□ -1.45
COL6A2P12110 RN7SL66P-201ENST00000582099 264 ntBASIC6□□□□□ -1.45
COL6A2P12110 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 AP001823.1-201ENST00000604056 1003 ntBASIC6□□□□□ -1.45
COL6A2P12110 AL390877.1-201ENST00000605704 214 ntBASIC6□□□□□ -1.45
COL6A2P12110 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 MIR6885-201ENST00000612241 66 ntBASIC6□□□□□ -1.45
COL6A2P12110 AC092794.1-201ENST00000612734 582 ntBASIC6□□□□□ -1.45
COL6A2P12110 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6□□□□□ -1.45
COL6A2P12110 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6□□□□□ -1.45
COL6A2P12110 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6□□□□□ -1.45
COL6A2P12110 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 AC127502.3-201ENST00000636170 1206 ntBASIC6□□□□□ -1.45
COL6A2P12110 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6□□□□□ -1.45
COL6A2P12110 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 AC010266.2-201ENST00000564741 3255 ntBASIC6□□□□□ -1.45
COL6A2P12110 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 CCT8P1-201ENST00000413611 1657 ntBASIC6□□□□□ -1.45
COL6A2P12110 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6□□□□□ -1.45
COL6A2P12110 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL6A2P12110 AP002512.4-202ENST00000641599 4530 ntBASIC6□□□□□ -1.45
COL6A2P12110 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6□□□□□ -1.45
COL6A2P12110 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 AC106872.5-201ENST00000508856 1416 ntBASIC5.99□□□□□ -1.45
COL6A2P12110 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 AC007842.1-201ENST00000597336 2039 ntBASIC5.99□□□□□ -1.45
COL6A2P12110 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.99□□□□□ -1.45
COL6A2P12110 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL6A2P12110 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.99□□□□□ -1.45
COL6A2P12110 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL6A2P12110 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL6A2P12110 RNU6-500P-201ENST00000362349 107 ntBASIC5.99□□□□□ -1.45
COL6A2P12110 RNA5SP375-201ENST00000362975 119 ntBASIC5.99□□□□□ -1.45
COL6A2P12110 RNU6-517P-201ENST00000384362 110 ntBASIC5.99□□□□□ -1.45
COL6A2P12110 PEX12P1-201ENST00000400284 1048 ntBASIC5.99□□□□□ -1.45
COL6A2P12110 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.99□□□□□ -1.45
COL6A2P12110 RNU6-77P-201ENST00000410554 91 ntBASIC5.99□□□□□ -1.45
COL6A2P12110 RN7SKP144-201ENST00000411108 279 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms