Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MRPS16P1-201ENST00000523462 412 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AC005363.1-201ENST00000530779 351 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGB1P09429 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.67□□□□□ -1.34
HMGB1P09429 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGB1P09429 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGB1P09429 AC008687.2-201ENST00000597865 520 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AP002906.1-201ENST00000603405 233 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AP003117.2-201ENST00000606010 545 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGB1P09429 AC004477.3-201ENST00000614061 590 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AC067852.7-201ENST00000623270 535 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AC080188.3-201ENST00000624842 748 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HMGB1P09429 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HMGB1P09429 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 AC106872.5-201ENST00000508856 1416 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.66□□□□□ -1.34
HMGB1P09429 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC104260.2-201ENST00000623551 3497 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC000123.3-201ENST00000624029 4975 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 OR52B3P-201ENST00000314715 928 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 GAPDHP24-201ENST00000328713 983 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 HSPD1P16-201ENST00000402302 394 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 AC069282.1-201ENST00000411911 526 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 RPS15AP40-201ENST00000419621 391 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 YWHAZP8-201ENST00000436935 731 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 RPS10P18-201ENST00000442662 495 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 OR51B8P-201ENST00000449892 769 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 snoU13.7-201ENST00000459220 104 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 RPS23P6-201ENST00000466136 431 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 RN7SL197P-201ENST00000466981 299 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 RPL21P18-201ENST00000469899 480 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGB1P09429 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGB1P09429 OR5M2P-201ENST00000529003 936 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AC124293.1-201ENST00000530034 493 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGB1P09429 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGB1P09429 CYB5AP5-201ENST00000549779 389 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGB1P09429 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC090079.2-201ENST00000575289 768 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AC015802.2-201ENST00000589690 189 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGB1P09429 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC010680.4-201ENST00000605334 543 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGB1P09429 AC093875.1-201ENST00000623688 504 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AL390318.1-201ENST00000624564 687 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AC007683.2-201ENST00000624681 714 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.66□□□□□ -1.34
HMGB1P09429 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGB1P09429 AL596275.2-204ENST00000641628 552 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 AL596275.2-206ENST00000641957 626 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 DCAF13P3-201ENST00000561147 1334 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 ERCC6-202ENST00000374127 1782 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 MTND4P8-201ENST00000514997 1362 ntBASIC6.66□□□□□ -1.34
HMGB1P09429 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGB1P09429 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
HMGB1P09429 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
HMGB1P09429 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGB1P09429 AL022322.2-201ENST00000624072 20397 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGB1P09429 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HMGB1P09429 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
HMGB1P09429 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGB1P09429 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.65□□□□□ -1.34
HMGB1P09429 AC092681.1-201ENST00000297369 291 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGB1P09429 HMGB3P19-201ENST00000403971 560 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 SLC20A1P1-201ENST00000413906 956 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms