Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC073508.1-201ENST00000428866 656 ntBASIC5.47□□□□□ -1.53
RB1P06400 AC023141.6-201ENST00000429418 337 ntBASIC5.47□□□□□ -1.53
RB1P06400 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.47□□□□□ -1.53
RB1P06400 RPL7P11-201ENST00000437586 658 ntBASIC5.47□□□□□ -1.53
RB1P06400 AC074367.1-201ENST00000438685 1125 ntBASIC5.47□□□□□ -1.53
RB1P06400 AL354714.3-201ENST00000447284 493 ntBASIC5.47□□□□□ -1.53
RB1P06400 AL157827.1-201ENST00000447622 132 ntBASIC5.47□□□□□ -1.53
RB1P06400 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.47□□□□□ -1.53
RB1P06400 AC009963.2-201ENST00000453431 138 ntBASIC5.47□□□□□ -1.53
RB1P06400 RPS23P7-201ENST00000466210 444 ntBASIC5.47□□□□□ -1.53
RB1P06400 AC011005.3-201ENST00000491624 395 ntBASIC5.47□□□□□ -1.53
RB1P06400 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
RB1P06400 RPS24P16-201ENST00000497294 392 ntBASIC5.47□□□□□ -1.53
RB1P06400 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RB1P06400 AC008628.1-201ENST00000508663 265 ntBASIC5.47□□□□□ -1.53
RB1P06400 MTCYBP19-201ENST00000517463 1124 ntBASIC5.47□□□□□ -1.53
RB1P06400 IGHV3-63-201ENST00000518422 341 ntBASIC5.47□□□□□ -1.53
RB1P06400 AC034205.1-201ENST00000520621 638 ntBASIC5.47□□□□□ -1.53
RB1P06400 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.47□□□□□ -1.53
RB1P06400 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 AL136520.1-202ENST00000555494 763 ntBASIC5.47□□□□□ -1.53
RB1P06400 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.47□□□□□ -1.53
RB1P06400 AC136624.4-201ENST00000573044 370 ntBASIC5.47□□□□□ -1.53
RB1P06400 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.47□□□□□ -1.53
RB1P06400 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RB1P06400 AC084373.1-201ENST00000603311 235 ntBASIC5.47□□□□□ -1.53
RB1P06400 AC007423.1-201ENST00000605009 627 ntBASIC5.47□□□□□ -1.53
RB1P06400 AL450270.1-201ENST00000606160 391 ntBASIC5.47□□□□□ -1.53
RB1P06400 AL096803.3-201ENST00000609032 532 ntBASIC5.47□□□□□ -1.53
RB1P06400 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.47□□□□□ -1.53
RB1P06400 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.47□□□□□ -1.53
RB1P06400 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.46□□□□□ -1.53
RB1P06400 AC027228.2-201ENST00000567141 2154 ntBASIC5.46□□□□□ -1.53
RB1P06400 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.46□□□□□ -1.53
RB1P06400 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RB1P06400 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RB1P06400 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RB1P06400 RNA5SP453-201ENST00000362503 119 ntBASIC5.46□□□□□ -1.54
RB1P06400 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.46□□□□□ -1.54
RB1P06400 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.46□□□□□ -1.54
RB1P06400 GLULP6-201ENST00000399502 913 ntBASIC5.46□□□□□ -1.54
RB1P06400 PPIAP9-201ENST00000403866 498 ntBASIC5.46□□□□□ -1.54
RB1P06400 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.46□□□□□ -1.54
RB1P06400 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.46□□□□□ -1.54
RB1P06400 AL354868.1-201ENST00000417077 482 ntBASIC5.46□□□□□ -1.54
RB1P06400 RPL23AP4-201ENST00000427757 463 ntBASIC5.46□□□□□ -1.54
RB1P06400 AC124944.2-201ENST00000429866 1242 ntBASIC5.46□□□□□ -1.54
RB1P06400 AL513321.1-201ENST00000441175 761 ntBASIC5.46□□□□□ -1.54
RB1P06400 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.46□□□□□ -1.54
RB1P06400 RWDD4P1-201ENST00000488019 565 ntBASIC5.46□□□□□ -1.54
RB1P06400 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.46□□□□□ -1.54
RB1P06400 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.46□□□□□ -1.54
RB1P06400 TOMM20P2-201ENST00000540082 421 ntBASIC5.46□□□□□ -1.54
RB1P06400 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.46□□□□□ -1.54
RB1P06400 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.46□□□□□ -1.54
RB1P06400 AC005242.1-201ENST00000585658 438 ntBASIC5.46□□□□□ -1.54
RB1P06400 AC068790.7-201ENST00000602347 528 ntBASIC5.46□□□□□ -1.54
RB1P06400 AL512782.1-201ENST00000603093 364 ntBASIC5.46□□□□□ -1.54
RB1P06400 AC006363.1-201ENST00000603806 463 ntBASIC5.46□□□□□ -1.54
RB1P06400 AL139124.1-201ENST00000609123 421 ntBASIC5.46□□□□□ -1.54
RB1P06400 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RB1P06400 AL512506.1-201ENST00000613918 449 ntBASIC5.46□□□□□ -1.54
RB1P06400 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RB1P06400 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RB1P06400 MAPK10-338ENST00000641647 3362 ntBASIC5.46□□□□□ -1.54
RB1P06400 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.46□□□□□ -1.54
RB1P06400 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RB1P06400 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RB1P06400 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.45□□□□□ -1.54
RB1P06400 AP001002.1-201ENST00000625148 1513 ntBASIC5.45□□□□□ -1.54
RB1P06400 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 SNORA70.2-201ENST00000364506 135 ntBASIC5.45□□□□□ -1.54
RB1P06400 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.45□□□□□ -1.54
RB1P06400 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 HMGB3P7-201ENST00000400214 611 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms