Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RPL21P67-201ENST00000402896 478 ntBASIC5.17□□□□□ -1.58
LDB2O43679 RPL10P10-201ENST00000403509 664 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AL390316.1-201ENST00000406279 553 ntBASIC5.17□□□□□ -1.58
LDB2O43679 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
LDB2O43679 RN7SKP16-201ENST00000410180 299 ntBASIC5.17□□□□□ -1.58
LDB2O43679 TATDN1P1-201ENST00000414123 891 ntBASIC5.17□□□□□ -1.58
LDB2O43679 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
LDB2O43679 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LDB2O43679 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.17□□□□□ -1.58
LDB2O43679 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.17□□□□□ -1.58
LDB2O43679 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.17□□□□□ -1.58
LDB2O43679 AC090602.1-201ENST00000469695 252 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC020779.1-201ENST00000478757 796 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC079841.1-201ENST00000481228 950 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC004815.1-201ENST00000484185 331 ntBASIC5.17□□□□□ -1.58
LDB2O43679 RPS3AP6-201ENST00000484430 795 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC072052.1-201ENST00000496556 306 ntBASIC5.17□□□□□ -1.58
LDB2O43679 MYL12BP2-201ENST00000503948 512 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.17□□□□□ -1.58
LDB2O43679 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.17□□□□□ -1.58
LDB2O43679 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.17□□□□□ -1.58
LDB2O43679 AC024940.3-201ENST00000538551 316 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 MIR4660-201ENST00000583549 74 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 AC011492.1-201ENST00000600023 315 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC095055.1-201ENST00000603472 1113 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC005034.4-201ENST00000603612 899 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC021851.1-201ENST00000608537 1082 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC006946.3-201ENST00000609791 756 ntBASIC5.17□□□□□ -1.58
LDB2O43679 RNU6-1192P-201ENST00000612197 107 ntBASIC5.17□□□□□ -1.58
LDB2O43679 RPSAP73-201ENST00000614820 330 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AC078880.5-201ENST00000617845 421 ntBASIC5.17□□□□□ -1.58
LDB2O43679 RNU6-489P-201ENST00000618289 107 ntBASIC5.17□□□□□ -1.58
LDB2O43679 AP002505.2-201ENST00000623585 696 ntBASIC5.17□□□□□ -1.58
LDB2O43679 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.17□□□□□ -1.58
LDB2O43679 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.17□□□□□ -1.58
LDB2O43679 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.17□□□□□ -1.58
LDB2O43679 MAPK10-328ENST00000641553 4009 ntBASIC5.17□□□□□ -1.58
LDB2O43679 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LDB2O43679 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
LDB2O43679 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 AC112255.1-201ENST00000624070 2493 ntBASIC5.17□□□□□ -1.58
LDB2O43679 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
LDB2O43679 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 AC007382.1-201ENST00000624376 2618 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC132825.1-201ENST00000463573 2247 ntBASIC5.16□□□□□ -1.58
LDB2O43679 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
LDB2O43679 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.16□□□□□ -1.58
LDB2O43679 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LDB2O43679 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.16□□□□□ -1.58
LDB2O43679 AL445213.1-201ENST00000412589 747 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.16□□□□□ -1.58
LDB2O43679 VN1R42P-201ENST00000424651 344 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.16□□□□□ -1.58
LDB2O43679 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.16□□□□□ -1.58
LDB2O43679 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 TPTE2P3-201ENST00000441562 1189 ntBASIC5.16□□□□□ -1.58
LDB2O43679 RPL7AP61-201ENST00000443410 636 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 AC021660.1-201ENST00000465006 554 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC009127.1-201ENST00000467090 155 ntBASIC5.16□□□□□ -1.58
LDB2O43679 RPS18P6-201ENST00000476880 458 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC005412.2-201ENST00000492004 341 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.16□□□□□ -1.58
LDB2O43679 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.16□□□□□ -1.58
LDB2O43679 ASNSP4-201ENST00000511103 447 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 AC010476.1-201ENST00000519111 851 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC010376.1-201ENST00000522101 334 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 AC021451.1-201ENST00000523498 1129 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.16□□□□□ -1.58
LDB2O43679 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.16□□□□□ -1.58
LDB2O43679 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.16□□□□□ -1.58
LDB2O43679 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.16□□□□□ -1.58
LDB2O43679 AC124283.4-201ENST00000581815 456 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC004908.3-201ENST00000610248 625 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AC140725.3-201ENST00000616193 880 ntBASIC5.16□□□□□ -1.58
LDB2O43679 BNIP3P41-202ENST00000616656 861 ntBASIC5.16□□□□□ -1.58
LDB2O43679 AL590396.4-201ENST00000636779 956 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms