Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC245047.2-201ENST00000441060 530 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.76□□□□□ -1.65
LSM1O15116 SETP20-201ENST00000457046 852 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.76□□□□□ -1.65
LSM1O15116 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.76□□□□□ -1.65
LSM1O15116 ECM1P2-201ENST00000503354 1577 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AC083829.1-201ENST00000503756 657 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.76□□□□□ -1.65
LSM1O15116 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.76□□□□□ -1.65
LSM1O15116 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LSM1O15116 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.76□□□□□ -1.65
LSM1O15116 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.76□□□□□ -1.65
LSM1O15116 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LSM1O15116 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.76□□□□□ -1.65
LSM1O15116 RNF138P2-201ENST00000603490 592 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AC004241.3-201ENST00000611728 517 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AL049794.2-201ENST00000616301 365 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AC099494.2-201ENST00000623371 978 ntBASIC4.76□□□□□ -1.65
LSM1O15116 AL356121.2-201ENST00000624715 780 ntBASIC4.76□□□□□ -1.65
LSM1O15116 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LSM1O15116 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LSM1O15116 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
LSM1O15116 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.76□□□□□ -1.65
LSM1O15116 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LSM1O15116 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.76□□□□□ -1.65
LSM1O15116 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LSM1O15116 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LSM1O15116 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LSM1O15116 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.75□□□□□ -1.65
LSM1O15116 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 CASC19-206ENST00000641028 1430 ntBASIC4.75□□□□□ -1.65
LSM1O15116 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LSM1O15116 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.75□□□□□ -1.65
LSM1O15116 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LSM1O15116 AC008549.2-201ENST00000333482 706 ntBASIC4.75□□□□□ -1.65
LSM1O15116 MIR323A-201ENST00000362199 86 ntBASIC4.75□□□□□ -1.65
LSM1O15116 RNA5SP502-201ENST00000362694 119 ntBASIC4.75□□□□□ -1.65
LSM1O15116 GCNT6-201ENST00000379591 934 ntBASIC4.75□□□□□ -1.65
LSM1O15116 NCSTNP1-201ENST00000406229 144 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AL139039.2-201ENST00000407436 479 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AL603766.1-201ENST00000407763 664 ntBASIC4.75□□□□□ -1.65
LSM1O15116 NPM1P4-201ENST00000414095 812 ntBASIC4.75□□□□□ -1.65
LSM1O15116 EIF4HP2-201ENST00000424380 563 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AC092162.1-201ENST00000432828 434 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.75□□□□□ -1.65
LSM1O15116 RPL12P11-201ENST00000439970 501 ntBASIC4.75□□□□□ -1.65
LSM1O15116 OR7E125P-201ENST00000443450 846 ntBASIC4.75□□□□□ -1.65
LSM1O15116 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.75□□□□□ -1.65
LSM1O15116 OR6C72P-201ENST00000451403 892 ntBASIC4.75□□□□□ -1.65
LSM1O15116 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.75□□□□□ -1.65
LSM1O15116 AC097484.1-201ENST00000471148 389 ntBASIC4.75□□□□□ -1.65
LSM1O15116 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.75□□□□□ -1.65
LSM1O15116 UBA52P7-201ENST00000486088 380 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.75□□□□□ -1.65
LSM1O15116 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.75□□□□□ -1.65
LSM1O15116 AC090312.1-201ENST00000580637 348 ntBASIC4.75□□□□□ -1.65
LSM1O15116 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.75□□□□□ -1.65
LSM1O15116 AC087783.2-201ENST00000605070 562 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AL592494.3-201ENST00000609485 464 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AC126915.2-201ENST00000610957 190 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AC015922.4-201ENST00000612568 690 ntBASIC4.75□□□□□ -1.65
LSM1O15116 uc_338.18-201ENST00000615451 175 ntBASIC4.75□□□□□ -1.65
LSM1O15116 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.75□□□□□ -1.65
LSM1O15116 AP002505.2-201ENST00000623585 696 ntBASIC4.75□□□□□ -1.65
LSM1O15116 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LSM1O15116 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.75□□□□□ -1.65
LSM1O15116 SCARNA15-201ENST00000607520 4325 ntBASIC4.75□□□□□ -1.65
LSM1O15116 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LSM1O15116 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LSM1O15116 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LSM1O15116 DDX18P5-201ENST00000534547 1306 ntBASIC4.74□□□□□ -1.65
LSM1O15116 DHX9P1-201ENST00000436565 3076 ntBASIC4.74□□□□□ -1.65
LSM1O15116 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.74□□□□□ -1.65
LSM1O15116 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LSM1O15116 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.74□□□□□ -1.65
LSM1O15116 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LSM1O15116 RN7SKP162-201ENST00000363605 345 ntBASIC4.74□□□□□ -1.65
LSM1O15116 SNORA66-201ENST00000384792 133 ntBASIC4.74□□□□□ -1.65
LSM1O15116 U3.25-201ENST00000391209 220 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AL136116.2-201ENST00000404020 785 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.74□□□□□ -1.65
LSM1O15116 RPL34P20-201ENST00000442771 351 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.74□□□□□ -1.65
LSM1O15116 AL162388.1-201ENST00000450912 352 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AC022431.1-201ENST00000450941 438 ntBASIC4.74□□□□□ -1.65
LSM1O15116 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LSM1O15116 OR2AO1P-201ENST00000476497 403 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms