Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AL450345.1-202ENST00000605741 3881 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 SNURFL-201ENST00000309296 343 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 U3.3-201ENST00000362986 216 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 RNA5SP455-201ENST00000365190 119 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 RNU6-532P-201ENST00000384318 107 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AL109941.1-201ENST00000401925 229 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 RPL37P18-201ENST00000411602 243 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 ARL2BPP3-201ENST00000421226 480 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC006466.1-201ENST00000438721 289 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC103833.1-201ENST00000517442 172 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 NPM1P35-201ENST00000533043 868 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC093014.1-201ENST00000548926 724 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC233266.2-201ENST00000567067 528 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AP005262.1-201ENST00000582646 997 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC093799.2-201ENST00000610062 578 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AL512506.1-201ENST00000613918 449 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 MIR1264-201ENST00000616374 69 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 THAP12P4-201ENST00000528321 2266 ntBASIC4.7□□□□□ -1.66
NPIPA3F8WFD2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 RNA5SP123-201ENST00000363244 119 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 RNA5SP90-201ENST00000364801 99 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 GJA6P-201ENST00000415117 1042 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 RBMY2KP-201ENST00000418221 992 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 RPS4XP16-201ENST00000427198 791 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 PTP4A1P3-201ENST00000433661 420 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 Z80107.2-201ENST00000445127 392 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 SUMO2P1-206ENST00000445436 284 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 HIGD1AP8-201ENST00000453927 274 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC097484.1-201ENST00000471148 389 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC096741.1-201ENST00000472250 846 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC020779.1-201ENST00000478757 796 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC010468.3-201ENST00000508225 458 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 MIR3934-201ENST00000579806 107 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL162431.4-201ENST00000604674 411 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 KATNBL1P5-201ENST00000605015 517 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AL645927.2-201ENST00000618350 349 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 AC119674.1-212ENST00000641155 993 ntBASIC4.69□□□□□ -1.66
NPIPA3F8WFD2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms