Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 CCDC150P1-201ENST00000537123 2215 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC096921.2-201ENST00000561507 1916 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 CASC19-280ENST00000642102 1351 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 RNU5F-6P-201ENST00000362979 116 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 RNY4P14-201ENST00000363656 96 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC074375.1-201ENST00000372993 192 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 MIR99A-201ENST00000384906 81 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 RNA5SP105-201ENST00000391123 113 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL391419.1-201ENST00000398901 1275 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL096800.1-201ENST00000405326 893 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 RPLP1P10-201ENST00000413972 339 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 OFD1P18Y-201ENST00000420889 959 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 GAPDHP49-201ENST00000421421 961 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 RPL12P16-201ENST00000431098 498 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 UBE2FP3-201ENST00000436366 524 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC007790.1-201ENST00000439081 782 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 GAPDHP33-201ENST00000443168 1013 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC104306.1-201ENST00000449702 371 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC008945.1-201ENST00000505144 499 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC010342.1-201ENST00000514047 877 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 SCARNA15.1-201ENST00000516384 125 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 OR4C1P-201ENST00000530880 937 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 PRR13P3-201ENST00000603578 376 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL049634.3-201ENST00000604968 457 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AC092681.3-201ENST00000609463 678 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL121890.2-201ENST00000617644 465 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 AP002505.2-201ENST00000623585 696 ntBASIC6.37□□□□□ -1.39
SSU72Q9NP77 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSU72Q9NP77 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSU72Q9NP77 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL034370.1-201ENST00000397254 1590 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 RNU6-619P-201ENST00000365146 108 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 RNU6-98P-201ENST00000384173 107 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 Y_RNA.509-201ENST00000384506 99 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 RNU1-56P-201ENST00000391303 164 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL139184.1-202ENST00000422303 222 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 CYCSP11-201ENST00000436426 315 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms