Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC060788.1-201ENST00000521318 469 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AL049830.4-201ENST00000555149 351 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 HMGN1P26-201ENST00000558737 303 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS11Q9H270 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 AL513327.3-201ENST00000602618 469 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AL645933.2-201ENST00000606743 1207 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC128687.2-201ENST00000609657 566 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AL354976.1-201ENST00000613843 387 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS11Q9H270 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC011815.3-201ENST00000624194 473 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AC090897.3-201ENST00000636973 1157 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS11Q9H270 CASC19-264ENST00000641912 1184 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC016745.2-201ENST00000608834 3443 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC011933.2-201ENST00000578539 2790 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS11Q9H270 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 HSPD1P9-201ENST00000420325 1636 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 CCT8P1-201ENST00000413611 1657 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 CR848007.1-201ENST00000442354 1699 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
VPS11Q9H270 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS11Q9H270 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS11Q9H270 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 RNA5SP211-201ENST00000365516 117 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS11Q9H270 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC234772.1-201ENST00000377927 937 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS11Q9H270 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 PSMA6P1-201ENST00000400275 741 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 SNRPEP6-201ENST00000407465 277 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC023128.2-201ENST00000420880 1223 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 VN1R20P-201ENST00000425215 966 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC124944.2-201ENST00000429866 1242 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 ETF1P3-201ENST00000430422 1160 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS11Q9H270 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC242426.1-201ENST00000435270 960 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 FABP5P3-201ENST00000437960 408 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 AP000936.3-201ENST00000438127 255 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 RPS23P9-201ENST00000448848 438 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 FDX1P2-201ENST00000450769 375 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC004890.1-201ENST00000461005 181 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 RPL12P30-201ENST00000488389 499 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 SNORA74.1-201ENST00000516320 180 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 AC018442.3-201ENST00000523025 183 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS11Q9H270 OR5G4P-201ENST00000525251 760 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 EIF4A2P5-201ENST00000529914 499 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS11Q9H270 SETP1-201ENST00000556014 845 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS11Q9H270 AC011891.2-201ENST00000604949 397 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 AP002360.3-201ENST00000607673 710 ntBASIC5.91□□□□□ -1.46
VPS11Q9H270 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms