Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 EEF1A1P1-201ENST00000447052 739 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 HMGB3P21-201ENST00000452483 547 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 RANP1-206ENST00000455094 651 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 AL133445.1-201ENST00000467051 452 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 RN7SL184P-201ENST00000488308 297 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 RN7SL547P-201ENST00000490793 290 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 IGKV2-18-201ENST00000522607 343 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 OR5AM1P-201ENST00000532136 1032 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 AC122688.1-201ENST00000541494 223 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VMP1Q96GC9 RN7SL290P-201ENST00000578661 300 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 MIR3176-201ENST00000582210 90 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 ZNF92P3-201ENST00000596594 954 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 AP006248.2-201ENST00000623309 592 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VMP1Q96GC9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.14□□□□□ -1.59
VMP1Q96GC9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VMP1Q96GC9 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AL731566.1-201ENST00000620490 1937 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 LINC01355-201ENST00000566551 5444 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 OR10J6P-201ENST00000289731 930 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 SNORD115-48-201ENST00000364764 76 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AL391361.1-201ENST00000405580 489 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 LINC01881-201ENST00000416103 412 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 RIMKLBP2-201ENST00000424737 654 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 XKRY2-201ENST00000442362 1093 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 IGBP1P3-201ENST00000447449 1000 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 PRPF38AP1-201ENST00000451976 933 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 PSAT1P4-201ENST00000466500 526 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AC025181.1-201ENST00000477507 416 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 MYL12BP2-201ENST00000503948 512 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AC010285.3-201ENST00000511668 676 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AP006245.2-201ENST00000522004 300 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 MTCYBP13-201ENST00000578634 1093 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 SUGT1P3-202ENST00000604259 383 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 AC015849.2-201ENST00000605738 409 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 AP000894.4-201ENST00000610185 483 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 AC007204.2-201ENST00000615022 616 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 CR392039.4-201ENST00000624968 501 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
VMP1Q96GC9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.13□□□□□ -1.59
VMP1Q96GC9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VMP1Q96GC9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms