Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC013244.1-201ENST00000604279 193 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 SDR42E1P1-201ENST00000611327 477 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC009452.1-201ENST00000640823 606 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 RLIMP2-201ENST00000427891 1563 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AL132640.2-201ENST00000559968 1698 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 RNA5SP498-201ENST00000411342 120 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC105402.1-201ENST00000413336 545 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 LINC01347-201ENST00000417964 355 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 ARF4P4-201ENST00000439608 520 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AL096803.2-201ENST00000450032 677 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 EIF1P7-201ENST00000487533 337 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC098976.1-201ENST00000513014 541 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 BX510359.5-201ENST00000515651 304 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC027308.1-201ENST00000517993 110 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC022360.1-201ENST00000521058 340 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 MIR4509-3-201ENST00000578671 94 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 MIR4509-2-201ENST00000583920 94 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC009237.13-201ENST00000603193 276 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC010632.3-201ENST00000611377 369 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 MIR4509-1-201ENST00000618224 94 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC145207.9-201ENST00000623802 325 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 AC090506.2-201ENST00000624521 419 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 MTCO1P18-201ENST00000455518 1419 ntBASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CHMP4CQ96CF2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.46□□□□□ -1.37
CHMP4CQ96CF2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CHMP4CQ96CF2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CHMP4CQ96CF2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CHMP4CQ96CF2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 RNU5E-10P-201ENST00000363506 118 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 RNU6-298P-201ENST00000390888 96 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC009804.1-201ENST00000400949 179 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AL133388.1-201ENST00000404509 287 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 BMS1P13-201ENST00000417301 885 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 MTCO3P4-201ENST00000419236 787 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC023128.2-201ENST00000420880 1223 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC073310.1-201ENST00000423226 1033 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 MTCO2P17-201ENST00000424336 677 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 MTCO2P23-201ENST00000425216 680 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC093422.3-201ENST00000428506 305 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC092447.2-201ENST00000435487 669 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms