Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 EEF1B2P6-201ENST00000445713 673 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 HMGN1P36-201ENST00000446623 298 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 NOP56P2-201ENST00000447491 769 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 XKRYP5-201ENST00000449659 483 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC144530.1-201ENST00000452862 555 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 YWHAEP1-201ENST00000453697 763 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 RPL37P3-201ENST00000456825 293 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 RPS27AP2-201ENST00000457576 465 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 CBX1P5-201ENST00000475330 559 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC058823.1-201ENST00000485315 474 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 RNA5SP464-201ENST00000516251 108 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AP004607.2-201ENST00000533949 322 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC025260.1-201ENST00000548858 430 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC022884.2-201ENST00000578535 580 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 MIR3614-201ENST00000581261 86 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC012616.1-201ENST00000600294 197 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC133552.5-201ENST00000604266 540 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC009027.1-201ENST00000604510 479 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL162431.4-201ENST00000604674 411 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL118522.2-201ENST00000616045 615 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 MIR1264-201ENST00000616374 69 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 CU639417.4-201ENST00000623928 207 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC011815.3-201ENST00000624194 473 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL450345.1-202ENST00000605741 3881 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL031119.1-201ENST00000404707 1879 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 RPL21P67-201ENST00000402896 478 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 TNPO1P1-201ENST00000423641 1138 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 FTH1P16-201ENST00000435241 552 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL161636.2-201ENST00000445179 927 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL672138.1-201ENST00000450604 1015 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 HMGB3P21-201ENST00000452483 547 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 DNAJB5P1-201ENST00000454004 806 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 RPS6P2-201ENST00000454208 705 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC245028.2-201ENST00000458673 253 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC022133.1-201ENST00000490961 571 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC023050.1-201ENST00000498198 304 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC074087.1-201ENST00000512059 724 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 MTATP6P1-201ENST00000514057 681 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 IGKV2-36-201ENST00000519999 223 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC093014.1-201ENST00000548926 724 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC025918.2-201ENST00000558683 763 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC106785.3-201ENST00000564064 847 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC115085.1-201ENST00000588924 229 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 FO393422.1-201ENST00000603908 708 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL021368.1-201ENST00000607490 540 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.78□□□□□ -1.64
PTP4A1Q93096 RN7SL787P-201ENST00000613000 284 ntBASIC4.78□□□□□ -1.64
PTP4A1Q93096 AC022106.2-201ENST00000620114 757 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms