Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC114781.3-201ENST00000512083 142 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC098976.1-201ENST00000513014 541 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AP000648.1-201ENST00000529682 397 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC122688.1-201ENST00000541494 223 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC068714.1-201ENST00000559623 800 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC008521.2-201ENST00000591021 259 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 BNIP3P4-201ENST00000604946 565 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AL031601.1-201ENST00000605702 394 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC106052.1-201ENST00000608029 497 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC026124.2-201ENST00000621847 656 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC006927.4-201ENST00000639187 543 ntBASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.94□□□□□ -1.62
RAB40AQ8WXH6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC006206.1-201ENST00000544842 3387 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 MTCO1P6-201ENST00000481192 1384 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 TTC39DP-201ENST00000416781 1688 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 RNU1-146P-201ENST00000364015 165 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 OR52E6-202ENST00000379946 954 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 RPS7P9-201ENST00000414704 586 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC092648.1-201ENST00000425870 423 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 RPL23AP19-201ENST00000436229 369 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 ELOCP11-201ENST00000436690 332 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 TCEA1P3-201ENST00000443005 880 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 ELOCP16-201ENST00000444494 332 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL929288.2-201ENST00000446368 407 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AP006222.1-205ENST00000450734 457 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 NXT1P1-201ENST00000458481 316 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL049874.2-201ENST00000492636 288 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC005912.1-201ENST00000495392 255 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC091860.1-201ENST00000505723 432 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC021193.1-201ENST00000511607 420 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 HMGB1P23-201ENST00000518743 568 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 OR8A2P-201ENST00000528631 952 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC124293.1-201ENST00000530034 493 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC079600.1-201ENST00000550326 297 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL356801.1-201ENST00000559320 294 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 MTCO1P40-201ENST00000574371 625 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 VN1R84P-201ENST00000593697 235 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 BNIP3P32-201ENST00000600015 554 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 VN1R74P-201ENST00000613259 503 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL021918.2-201ENST00000613415 194 ntBASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.93□□□□□ -1.62
RAB40AQ8WXH6 AL355480.1-201ENST00000629041 99 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms