Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL160275.2-201ENST00000412010 394 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 Z74021.1-201ENST00000423610 407 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AL451139.1-201ENST00000434718 346 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 OR7E125P-201ENST00000443450 846 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AL591623.2-201ENST00000449978 222 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 PGAM1P13-201ENST00000507497 754 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 TVP23CP2-201ENST00000571473 623 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 EIF1P5-201ENST00000585002 234 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AC005520.3-201ENST00000602874 370 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 AC005377.1-201ENST00000605126 456 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 CASC19-281ENST00000642118 1554 ntBASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC112Q8NEF3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 TRAV35-201ENST00000390462 330 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AL645733.1-201ENST00000402250 217 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 OR52B5P-201ENST00000435337 951 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AC000111.2-201ENST00000448200 210 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 RN7SL222P-201ENST00000476452 299 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 RPS18P6-201ENST00000476880 458 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 RPL7AP6-201ENST00000477943 801 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AC004453.1-201ENST00000487895 408 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AC108022.1-201ENST00000493466 478 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 NMNAT1P1-201ENST00000554095 876 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 MTND6P33-201ENST00000571794 183 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AP002505.2-201ENST00000623585 696 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 OR52B5P-202ENST00000641118 1110 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 OR4G1P-202ENST00000641173 1788 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 Z98755.1-201ENST00000407015 1384 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 NR1H5P-201ENST00000452683 1377 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 HSPD1P14-201ENST00000432666 1618 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 KPNA2P2-201ENST00000419546 1489 ntBASIC5.26□□□□□ -1.57
CCDC112Q8NEF3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 MIR765-201ENST00000390226 114 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 ARL4AP5-201ENST00000404372 599 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 RPS26P41-201ENST00000450370 284 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 ATP5G1P3-201ENST00000463301 410 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 RN7SL826P-201ENST00000479724 288 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 RN7SKP260-201ENST00000516907 149 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 MYL12AP1-201ENST00000518490 515 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AC105254.2-201ENST00000603636 436 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AC015813.4-201ENST00000610469 179 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 AL136295.6-201ENST00000610486 658 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 MIR7154-201ENST00000620673 73 ntBASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC112Q8NEF3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms