Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LTBQ06643 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 RN7SKP6-201ENST00000364795 319 ntBASIC4.94□□□□□ -1.62
LTBQ06643 RNU6-354P-201ENST00000383862 107 ntBASIC4.94□□□□□ -1.62
LTBQ06643 RNU6-610P-201ENST00000384264 107 ntBASIC4.94□□□□□ -1.62
LTBQ06643 MIR551A-201ENST00000385042 96 ntBASIC4.94□□□□□ -1.62
LTBQ06643 MIR23A-201ENST00000385245 73 ntBASIC4.94□□□□□ -1.62
LTBQ06643 Z86062.1-201ENST00000406773 777 ntBASIC4.94□□□□□ -1.62
LTBQ06643 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 PTP4A1P7-201ENST00000423476 514 ntBASIC4.94□□□□□ -1.62
LTBQ06643 NANOGP5-201ENST00000424456 877 ntBASIC4.94□□□□□ -1.62
LTBQ06643 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 AC245047.2-201ENST00000441060 530 ntBASIC4.94□□□□□ -1.62
LTBQ06643 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 AC079841.1-201ENST00000481228 950 ntBASIC4.94□□□□□ -1.62
LTBQ06643 RN7SL97P-201ENST00000486780 299 ntBASIC4.94□□□□□ -1.62
LTBQ06643 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LTBQ06643 AC024558.1-201ENST00000505008 528 ntBASIC4.94□□□□□ -1.62
LTBQ06643 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 MTCO3P28-201ENST00000513351 515 ntBASIC4.94□□□□□ -1.62
LTBQ06643 SCARNA20.4-201ENST00000516969 131 ntBASIC4.94□□□□□ -1.62
LTBQ06643 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 OR4U1P-201ENST00000554958 912 ntBASIC4.94□□□□□ -1.62
LTBQ06643 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.94□□□□□ -1.62
LTBQ06643 MIR4433B-201ENST00000581329 102 ntBASIC4.94□□□□□ -1.62
LTBQ06643 MIR4436B2-201ENST00000581415 91 ntBASIC4.94□□□□□ -1.62
LTBQ06643 MIR4436B1-201ENST00000583272 91 ntBASIC4.94□□□□□ -1.62
LTBQ06643 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.94□□□□□ -1.62
LTBQ06643 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 RNU6-84P-201ENST00000607737 102 ntBASIC4.94□□□□□ -1.62
LTBQ06643 OR7A19P-201ENST00000608051 733 ntBASIC4.94□□□□□ -1.62
LTBQ06643 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 AL359513.1-201ENST00000614364 557 ntBASIC4.94□□□□□ -1.62
LTBQ06643 AC011330.2-201ENST00000621680 635 ntBASIC4.94□□□□□ -1.62
LTBQ06643 AP003485.2-201ENST00000623636 610 ntBASIC4.94□□□□□ -1.62
LTBQ06643 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LTBQ06643 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
LTBQ06643 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LTBQ06643 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 AC009804.1-201ENST00000400949 179 ntBASIC4.93□□□□□ -1.62
LTBQ06643 ZNF602P-201ENST00000405929 924 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AL355615.1-201ENST00000406187 641 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AL356967.1-201ENST00000406305 431 ntBASIC4.93□□□□□ -1.62
LTBQ06643 RN7SKP273-201ENST00000411392 314 ntBASIC4.93□□□□□ -1.62
LTBQ06643 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 AC115285.1-201ENST00000424879 736 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.93□□□□□ -1.62
LTBQ06643 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.93□□□□□ -1.62
LTBQ06643 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 AL031313.1-201ENST00000448435 256 ntBASIC4.93□□□□□ -1.62
LTBQ06643 HMGB1P26-201ENST00000452520 628 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AC009963.2-201ENST00000453431 138 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AL035090.1-201ENST00000454835 332 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 RPL21P18-201ENST00000469899 480 ntBASIC4.93□□□□□ -1.62
LTBQ06643 MTCO3P35-201ENST00000485582 781 ntBASIC4.93□□□□□ -1.62
LTBQ06643 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.93□□□□□ -1.62
LTBQ06643 OR5H3P-201ENST00000502817 919 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms