Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SEPT7P7-201ENST00000420492 1301 ntBASIC4.21□□□□□ -1.73
LMO4P61968 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.21□□□□□ -1.73
LMO4P61968 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.21□□□□□ -1.73
LMO4P61968 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LMO4P61968 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
LMO4P61968 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LMO4P61968 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.21□□□□□ -1.73
LMO4P61968 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
LMO4P61968 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.21□□□□□ -1.74
LMO4P61968 RNU4-40P-201ENST00000364351 143 ntBASIC4.21□□□□□ -1.74
LMO4P61968 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 SNORA70.6-201ENST00000383934 134 ntBASIC4.21□□□□□ -1.74
LMO4P61968 SNORA48.4-201ENST00000391089 134 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC104297.1-201ENST00000393779 870 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.21□□□□□ -1.74
LMO4P61968 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.21□□□□□ -1.74
LMO4P61968 PCNPP4-201ENST00000414817 517 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AL158827.1-201ENST00000416300 391 ntBASIC4.21□□□□□ -1.74
LMO4P61968 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.21□□□□□ -1.74
LMO4P61968 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.21□□□□□ -1.74
LMO4P61968 AC009238.2-201ENST00000431026 355 ntBASIC4.21□□□□□ -1.74
LMO4P61968 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.21□□□□□ -1.74
LMO4P61968 MRPL50P1-201ENST00000431951 384 ntBASIC4.21□□□□□ -1.74
LMO4P61968 CETN4P-201ENST00000432407 469 ntBASIC4.21□□□□□ -1.74
LMO4P61968 BX323845.1-201ENST00000432417 179 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC008072.1-201ENST00000434254 824 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.21□□□□□ -1.74
LMO4P61968 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.21□□□□□ -1.74
LMO4P61968 OR7E125P-201ENST00000443450 846 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.21□□□□□ -1.74
LMO4P61968 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 AL354714.3-201ENST00000447284 493 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.21□□□□□ -1.74
LMO4P61968 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.21□□□□□ -1.74
LMO4P61968 RPS29P22-201ENST00000472363 168 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC128716.1-201ENST00000475129 166 ntBASIC4.21□□□□□ -1.74
LMO4P61968 RN7SL319P-201ENST00000480656 221 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC007686.1-201ENST00000488511 463 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.21□□□□□ -1.74
LMO4P61968 AC010350.1-201ENST00000504908 231 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC021193.1-201ENST00000511607 420 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC067904.2-201ENST00000517322 1283 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.21□□□□□ -1.74
LMO4P61968 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.21□□□□□ -1.74
LMO4P61968 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.21□□□□□ -1.74
LMO4P61968 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.21□□□□□ -1.74
LMO4P61968 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.21□□□□□ -1.74
LMO4P61968 AC093510.2-201ENST00000562820 896 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC122134.1-201ENST00000565664 1104 ntBASIC4.21□□□□□ -1.74
LMO4P61968 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.21□□□□□ -1.74
LMO4P61968 BMS1P7-201ENST00000602440 1052 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC025811.1-201ENST00000604312 472 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AP001033.2-201ENST00000609701 1003 ntBASIC4.21□□□□□ -1.74
LMO4P61968 AC087683.2-201ENST00000611384 326 ntBASIC4.21□□□□□ -1.74
LMO4P61968 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 AP000943.4-201ENST00000622912 357 ntBASIC4.21□□□□□ -1.74
LMO4P61968 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.21□□□□□ -1.74
LMO4P61968 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
LMO4P61968 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.21□□□□□ -1.74
LMO4P61968 AC092070.2-203ENST00000598377 3644 ntBASIC4.21□□□□□ -1.74
LMO4P61968 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.21□□□□□ -1.74
LMO4P61968 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 HSPA8P14-201ENST00000552265 1805 ntBASIC4.21□□□□□ -1.74
LMO4P61968 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LMO4P61968 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMO4P61968 SAMMSON-210ENST00000641260 1308 ntBASIC4.21□□□□□ -1.74
LMO4P61968 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LMO4P61968 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
LMO4P61968 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LMO4P61968 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 AC012618.3-205ENST00000637896 1496 ntBASIC4.2□□□□□ -1.74
LMO4P61968 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.2□□□□□ -1.74
LMO4P61968 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMO4P61968 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LMO4P61968 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LMO4P61968 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms