Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN6P56747 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CLDN6P56747 AC068870.3-201ENST00000625077 2536 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN6P56747 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CLDN6P56747 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
CLDN6P56747 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.72□□□□□ -1.65
CLDN6P56747 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN6P56747 AC108751.5-201ENST00000492880 1336 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CLDN6P56747 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLDN6P56747 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLDN6P56747 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
CLDN6P56747 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLDN6P56747 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.71□□□□□ -1.65
CLDN6P56747 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN6P56747 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN6P56747 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN6P56747 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLDN6P56747 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 SNORA70F-201ENST00000384142 135 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 AL357515.1-201ENST00000402967 542 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 AL136116.2-201ENST00000404020 785 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN6P56747 OR52E3P-201ENST00000452083 936 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN6P56747 RPL10P17-201ENST00000453852 316 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 PPIAP21-201ENST00000464473 501 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CLDN6P56747 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN6P56747 IMPA1P1-201ENST00000510718 842 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 AP000859.1-201ENST00000525536 307 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
CLDN6P56747 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN6P56747 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN6P56747 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN6P56747 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN6P56747 AC096586.2-201ENST00000610260 441 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 FAM27B-201ENST00000610601 213 ntBASIC4.71□□□□□ -1.66
CLDN6P56747 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.71□□□□□ -1.66
CLDN6P56747 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN6P56747 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN6P56747 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN6P56747 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN6P56747 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN6P56747 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 OR9K1P-202ENST00000641111 3217 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN6P56747 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 NCLP2-201ENST00000416078 1462 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
CLDN6P56747 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 TCP11X1-202ENST00000622971 1372 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CLDN6P56747 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN6P56747 RN7SKP227-201ENST00000364445 330 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 MIR137-201ENST00000385223 102 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 AL390316.1-201ENST00000406279 553 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN6P56747 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 RPS29P9-201ENST00000440360 171 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN6P56747 AC091180.1-201ENST00000462104 372 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN6P56747 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 AC116562.1-201ENST00000485355 781 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 AGGF1P3-201ENST00000493675 1213 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN6P56747 KATNBL1P4-201ENST00000503545 918 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN6P56747 AC016559.2-201ENST00000510759 359 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN6P56747 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.7□□□□□ -1.66
CLDN6P56747 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN6P56747 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN6P56747 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN6P56747 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN6P56747 TVP23CP2-201ENST00000571473 623 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 MTCYBP13-201ENST00000578634 1093 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 AC069366.1-201ENST00000583159 838 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms