Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 TCP1P3-201ENST00000414406 1498 ntBASIC4.99□□□□□ -1.61
LIMK2P53671 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LIMK2P53671 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.99□□□□□ -1.61
LIMK2P53671 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIMK2P53671 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIMK2P53671 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK2P53671 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK2P53671 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 AL022322.2-201ENST00000624072 20397 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
LIMK2P53671 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 RNA5SP455-201ENST00000365190 119 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 RNU6-729P-201ENST00000384399 107 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC106901.1-201ENST00000425086 698 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK2P53671 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.98□□□□□ -1.61
LIMK2P53671 RPL34P6-201ENST00000432390 345 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AL049745.1-201ENST00000433953 286 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AC073052.1-201ENST00000440417 714 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK2P53671 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LIMK2P53671 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK2P53671 AL031584.1-201ENST00000447169 754 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 TPT1P1-201ENST00000458495 518 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC010350.1-201ENST00000504908 231 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC138938.1-201ENST00000515431 782 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 RNU6-513P-201ENST00000516104 104 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 RNU6-362P-201ENST00000516736 90 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 SEC11B-201ENST00000518383 499 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC087783.2-201ENST00000605070 562 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AC015922.4-201ENST00000612568 690 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 MIR6798-201ENST00000612887 67 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 AC073575.2-201ENST00000614212 627 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.98□□□□□ -1.61
LIMK2P53671 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK2P53671 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK2P53671 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK2P53671 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK2P53671 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.97□□□□□ -1.61
LIMK2P53671 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK2P53671 AC097461.1-201ENST00000568928 2821 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK2P53671 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.97□□□□□ -1.61
LIMK2P53671 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK2P53671 RNU6-249P-201ENST00000363016 102 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 RNU6-618P-201ENST00000363518 112 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 SNORA70.10-201ENST00000384515 134 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 MIR7-1-201ENST00000384871 110 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LIMK2P53671 AL359643.1-201ENST00000404109 423 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 MIR1271-201ENST00000408537 86 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK2P53671 RPA2P2-201ENST00000419698 796 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK2P53671 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK2P53671 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK2P53671 IGHV5-78-201ENST00000450948 295 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 RN7SL517P-201ENST00000462240 305 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 AL591473.1-201ENST00000464297 313 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 AC092324.1-201ENST00000468671 324 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 RPL5P22-201ENST00000480199 884 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.97□□□□□ -1.61
LIMK2P53671 AC020890.1-201ENST00000491837 504 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 AC105233.1-201ENST00000498840 781 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK2P53671 AK4P6-201ENST00000505168 528 ntBASIC4.97□□□□□ -1.61
LIMK2P53671 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK2P53671 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK2P53671 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms