Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.97□□□□□ -1.61
PDX1P52945 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
PDX1P52945 AC234771.5-201ENST00000600161 514 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC098483.2-201ENST00000603158 454 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC242628.1-201ENST00000606810 391 ntBASIC4.97□□□□□ -1.61
PDX1P52945 OR8G7P-201ENST00000616658 848 ntBASIC4.97□□□□□ -1.61
PDX1P52945 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.97□□□□□ -1.61
PDX1P52945 AC105105.5-201ENST00000622635 1294 ntBASIC4.97□□□□□ -1.61
PDX1P52945 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.97□□□□□ -1.61
PDX1P52945 AC135068.12-201ENST00000637370 931 ntBASIC4.97□□□□□ -1.61
PDX1P52945 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDX1P52945 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDX1P52945 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.97□□□□□ -1.61
PDX1P52945 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDX1P52945 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.97□□□□□ -1.61
PDX1P52945 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PDX1P52945 AC017002.4-201ENST00000604721 1525 ntBASIC4.97□□□□□ -1.61
PDX1P52945 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.97□□□□□ -1.61
PDX1P52945 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.96□□□□□ -1.61
PDX1P52945 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.96□□□□□ -1.61
PDX1P52945 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PDX1P52945 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.96□□□□□ -1.61
PDX1P52945 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
PDX1P52945 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.96□□□□□ -1.62
PDX1P52945 AC133552.1-201ENST00000569988 4007 ntBASIC4.96□□□□□ -1.62
PDX1P52945 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PDX1P52945 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PDX1P52945 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 RN7SKP114-201ENST00000410327 279 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.96□□□□□ -1.62
PDX1P52945 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 AC046176.1-201ENST00000435260 1170 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 AL627224.1-201ENST00000448334 444 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.96□□□□□ -1.62
PDX1P52945 AC015908.1-201ENST00000478739 476 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC093663.2-201ENST00000484625 313 ntBASIC4.96□□□□□ -1.62
PDX1P52945 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 RPS12P31-201ENST00000491419 398 ntBASIC4.96□□□□□ -1.62
PDX1P52945 HMGB1P3-201ENST00000502802 616 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC021087.2-201ENST00000504656 1203 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC106806.2-201ENST00000509365 500 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC112206.4-201ENST00000515142 405 ntBASIC4.96□□□□□ -1.62
PDX1P52945 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 RN7SKP260-201ENST00000516907 149 ntBASIC4.96□□□□□ -1.62
PDX1P52945 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.96□□□□□ -1.62
PDX1P52945 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.96□□□□□ -1.62
PDX1P52945 CR383656.14-201ENST00000551951 406 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 AC018552.1-201ENST00000562099 811 ntBASIC4.96□□□□□ -1.62
PDX1P52945 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.96□□□□□ -1.62
PDX1P52945 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.96□□□□□ -1.62
PDX1P52945 AF230666.2-201ENST00000602328 725 ntBASIC4.96□□□□□ -1.62
PDX1P52945 BMS1P7-201ENST00000602440 1052 ntBASIC4.96□□□□□ -1.62
PDX1P52945 KATNBL1P5-201ENST00000605015 517 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC004775.1-201ENST00000607389 753 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC016542.1-201ENST00000608259 493 ntBASIC4.96□□□□□ -1.62
PDX1P52945 AC005021.1-201ENST00000608730 355 ntBASIC4.96□□□□□ -1.62
PDX1P52945 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.96□□□□□ -1.62
PDX1P52945 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 AL445493.3-201ENST00000619568 477 ntBASIC4.96□□□□□ -1.62
PDX1P52945 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.96□□□□□ -1.62
PDX1P52945 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
PDX1P52945 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDX1P52945 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PDX1P52945 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.95□□□□□ -1.62
PDX1P52945 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.95□□□□□ -1.62
PDX1P52945 OR9G4-201ENST00000302957 984 ntBASIC4.95□□□□□ -1.62
PDX1P52945 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PDX1P52945 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PDX1P52945 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 GSTA12P-201ENST00000402398 508 ntBASIC4.95□□□□□ -1.62
PDX1P52945 PTGES3P2-201ENST00000407942 482 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms