Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA13P31271 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA13P31271 RPL36AP15-201ENST00000444514 266 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA13P31271 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA13P31271 SLC25A18P1-201ENST00000449385 454 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 AL049829.1-201ENST00000465411 156 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 AC008897.1-201ENST00000494006 347 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA13P31271 ENPP7P11-201ENST00000505915 627 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 SETP12-201ENST00000514068 805 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA13P31271 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA13P31271 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA13P31271 DUX4L52-201ENST00000549363 777 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA13P31271 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA13P31271 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA13P31271 AL049839.1-201ENST00000556151 657 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA13P31271 MIR4270-201ENST00000581799 70 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA13P31271 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA13P31271 AC125494.2-201ENST00000602431 657 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 AC104687.2-201ENST00000604442 342 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 MIR6820-201ENST00000611508 62 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 MIR7703-201ENST00000620784 77 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 AL356490.1-201ENST00000623079 479 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA13P31271 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA13P31271 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
HOXA13P31271 AC011447.7-201ENST00000624228 1590 ntBASIC5.59□□□□□ -1.52
HOXA13P31271 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXA13P31271 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
HOXA13P31271 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXA13P31271 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXA13P31271 AC009501.3-201ENST00000605001 1352 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXA13P31271 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 AL356057.1-202ENST00000402263 756 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 UBE2V1P15-201ENST00000407776 448 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 RN7SKP216-201ENST00000411050 312 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 RPA2P2-201ENST00000419698 796 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA13P31271 AC007563.3-201ENST00000433233 371 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA13P31271 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA13P31271 OR1H1P-201ENST00000448731 937 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 MTND5P8-201ENST00000449817 1083 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 RPS29P33-201ENST00000456717 146 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA13P31271 MYL12BP2-201ENST00000503948 512 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA13P31271 RNA5SP228-201ENST00000516232 133 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 BNIP3P1-201ENST00000547295 580 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 AC116553.2-201ENST00000564203 463 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXA13P31271 AC091042.1-201ENST00000579213 173 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 SNORD39.2-201ENST00000579995 76 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 AC007497.1-201ENST00000610421 561 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 AL161616.1-201ENST00000611867 286 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 uc_338.18-201ENST00000615451 175 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA13P31271 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
HOXA13P31271 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA13P31271 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA13P31271 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA13P31271 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA13P31271 AC020633.1-201ENST00000468439 2247 ntBASIC5.58□□□□□ -1.52
HOXA13P31271 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HOXA13P31271 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXA13P31271 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA13P31271 SDAD1P1-202ENST00000524156 2051 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA13P31271 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA13P31271 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA13P31271 ADAM5-202ENST00000399789 1942 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 CDC27P2-201ENST00000425026 1922 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXA13P31271 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HOXA13P31271 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA13P31271 U3.30-201ENST00000391308 210 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 RNA5SP345-201ENST00000410646 108 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 RN7SKP100-201ENST00000411258 284 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 AL445213.1-201ENST00000412589 747 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 AC019050.1-201ENST00000418508 492 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA13P31271 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA13P31271 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA13P31271 AC245028.2-201ENST00000458673 253 ntBASIC5.57□□□□□ -1.52
HOXA13P31271 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA13P31271 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms